Gene YpsIP31758_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1022 
Symbolskp 
ID5385610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1226245 
End bp1226742 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content46% 
IMG OID640863995 
Productperiplasmic chaperone 
Protein accessionYP_001400006 
Protein GI153950599 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.0216507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAGT GGTTGTGTGC CGCAAGTCTA GGTTTAGCAT TGGCTGCTTC AGCCAGCGTT 
CAAGCAGCTG ACAAAATTGC TATTGTTAAT GTTTCCAGCA TTTTCCAACA ATTACCCGCG
CGTGAAGCCG TGGCTAAGCA GCTGGAGAAT GAATTCAAAG GCCGTGCAAC CGAACTGCAA
GGAATGGAGC GCGATCTGCA GACTAAAATG CAGAAGCTAC AACGTGATGG TTCTACCATG
AAAGCCAGTG ATCGTACCAA GCTGGAAAAT GAAGTAATGA AACAGCGTGA AACTTTCTCT
ACTAAAGCGC AGGCTTTTGA GCAAGATAAC CGCCGTCGTC AGGCAGAAGA GCGTAACAAA
ATCCTGAGCC GTATTCAGGA TGCTGTTAAA TCTGTTGCTA CCAAAGGTGG CTATGACGTA
GTCATTGATG CGAATGCAGT GGCATACGCT GATTCTTCTA AAGACATTAC TGCTGACGTA
CTGAAACAGG TTAAATAA
 
Protein sequence
MKKWLCAASL GLALAASASV QAADKIAIVN VSSIFQQLPA REAVAKQLEN EFKGRATELQ 
GMERDLQTKM QKLQRDGSTM KASDRTKLEN EVMKQRETFS TKAQAFEQDN RRRQAEERNK
ILSRIQDAVK SVATKGGYDV VIDANAVAYA DSSKDITADV LKQVK