Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1001 |
Symbol | |
ID | 5387602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1202417 |
End bp | 1203523 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640863972 |
Product | putative RNA 2'-O-ribose methyltransferase |
Protein accession | YP_001399985 |
Protein GI | 153949986 |
COG category | [R] General function prediction only |
COG ID | [COG2933] Predicted SAM-dependent methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00000913251 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATA AAATTGCTTT ATATTGCCGC TCCGGCTTTG AGAAAGAGTG TGCGGCAGAA ATAACAGAGA AGGCTGCACA GCTCGAAATC TTTGGTTTTG CACGGGTAAA AGAAAACAGT GGCTATGTAT TGTTTGAATG CTACCAGTTA GAGGATGCGG ATCGACTCAT CCGTGAAATA CCGTTCCGCG AGTTTATTTT CGCCCGCCAA ATGATGGTGG TGGGGGAGTT ATTGAAAGAC TTACCCCCAG AAGACCGTGT GTCACCGATC GTGGGAATGT TGGTTGGCGT TATTGAAAAA GCTGGCGAGT TACGTGTTGA GGTGGCCGAC ACCAATGAAA GCAAAGAGTT ACTCAAATTT TGCCGTAAGC TGACGGTACC TTTGCGTAGT GCTTTGCGTG AACAGAAAAT TCTGTCCGCT CGTGAGAATG CACATCGGCC AGTGGTGCAT GTGTTCTTTA TTGCGCCGGG TTGTTGTTAT GTTGGTTATT CTTACAGCAA TAATAACTCT CCATTCTATA TGGGGATCCC TCGACTTAAA TTCCCCTCCG ATGCACCAAG TCGCTCAACC TTAAAACTGG AAGAGGCATT CCATGTATTT ATCCCCGCGG ATGAATGGGA GGAGCGTTTA GCCAGTGGTA TGCATGCTGT CGATTTAGGC GCTTGTCCCG GTGGCTGGAC TTATCAATTA GTTCAACGCA GCATGATGAT ACAAGCGGTT GATAATGGTT TGATGGCACA AAGCCTGATG GATACGGGGC AGGTCACACA TCACCGTGCT GATGGTTTTA AGTATGAGCC TACCCGCAGC AATATTTATT GGTTAGTGTG TGACATGGTG GAAAAACCAA CAAAGGTCAC GCAGCTTATC ACCAAATGGC TAGTCAATGG TTGGTGCCGT GAAGCGATCT TCAACCTGAA ATTACCAATG AAAAAGCGTT ATGAAGAAGT TGTACAAAAT TTAGCAATGA TGGATGAGCA GTTGAAAGAA AACGGTATTA ATGCTGATAT CCATGCCAAA CAGCTCTACC ATGATCGCGA AGAAGTTACG GTGCATGTCC GTCGTATCTG GTCGGGTGCA CCGGGCCGCC GTGATGAGCG TTATTAG
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Protein sequence | MNNKIALYCR SGFEKECAAE ITEKAAQLEI FGFARVKENS GYVLFECYQL EDADRLIREI PFREFIFARQ MMVVGELLKD LPPEDRVSPI VGMLVGVIEK AGELRVEVAD TNESKELLKF CRKLTVPLRS ALREQKILSA RENAHRPVVH VFFIAPGCCY VGYSYSNNNS PFYMGIPRLK FPSDAPSRST LKLEEAFHVF IPADEWEERL ASGMHAVDLG ACPGGWTYQL VQRSMMIQAV DNGLMAQSLM DTGQVTHHRA DGFKYEPTRS NIYWLVCDMV EKPTKVTQLI TKWLVNGWCR EAIFNLKLPM KKRYEEVVQN LAMMDEQLKE NGINADIHAK QLYHDREEVT VHVRRIWSGA PGRRDERY
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