Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0996 |
Symbol | |
ID | 5385162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1197590 |
End bp | 1198417 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640863966 |
Product | thiF family protein |
Protein accession | YP_001399980 |
Protein GI | 153947627 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.0511396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACAG CCTATTCCGA AGCTTACCAA CAGCGGTTTG GTGGTATTGC ACGCCTCTAT GGCCAACAGG CATTGGCGCT TTTTTCACAG GCGCATGTTT GTGTCATCGG TATTGGCGGC GTAGGCTCAT GGGTGGCGGA AGCATTGGCG CGTACTGGTA TCGGTGCGAT TACACTAATT GATATGGATG ATGTTTGTGT CACGAATACT AACCGTCAAA TCCATGCTCT GCGCCACAAC ATCGGGCAGG CTAAAACAGA AGTCATGGCC GAGCGTATTC TGGCCATCAA TCCTGAATGT CATGTGACTT GTATTGATGA TTTTATTACT GCGGATAATG TCGCTGAGCT TTTAAATAAG AATTTCAGCT ATGTTATTGA TGCAATTGAT AGTGTGCGCC CAAAAGCTGC GCTGTTGTCT TACTGCCGTC GCTATAAAAT CCCAGTGGTG ACTACCGGTG GAGCGGGTGG GCAAATTGAT CCAACCCGTA TTGCCGTGGT TGATCTGGCT AAAACCATCC AAGATCCTTT AGCTGCAAAA CTGCGCGAAA GACTGAAAAG TGATTTTAAC GTGGTGAAAA ACAGCAAAGG TAAGCTAGGT ATTGACTGTG TTTTCTCCAG TGAGCCTTTG GTCTATCCAC AAGCCGATGG CTCTGTGTGT GCATCCCGCA GCACTGCCGA AGGACCTAAA AAAATGGATT GCACCTCTGG ATTCGGCTCG GCAACGATGG TTACTGCCAC GTTTGGCTTT GTTGCTGTGT CTCATGTATT GAAGAAGATG ATGGCTAAAG CGGCCCGTCA GCACGAGTCA GCCGCCACTG CGTCATAG
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Protein sequence | MSTAYSEAYQ QRFGGIARLY GQQALALFSQ AHVCVIGIGG VGSWVAEALA RTGIGAITLI DMDDVCVTNT NRQIHALRHN IGQAKTEVMA ERILAINPEC HVTCIDDFIT ADNVAELLNK NFSYVIDAID SVRPKAALLS YCRRYKIPVV TTGGAGGQID PTRIAVVDLA KTIQDPLAAK LRERLKSDFN VVKNSKGKLG IDCVFSSEPL VYPQADGSVC ASRSTAEGPK KMDCTSGFGS ATMVTATFGF VAVSHVLKKM MAKAARQHES AATAS
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