| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0963 |
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| Symbol | |
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| ID | 5386094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1151034 |
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| End bp | 1151867 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640863928 |
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| Product | type IV prepilin peptidase |
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| Protein accession | YP_001399946 |
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| Protein GI | 153947137 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTTT TTTTTGTGGG CTATTTAATT TTAGGGGCCA TGGTAGGCAG CTTTCTTAAT
GTTTTAATCT ATAGATTGCC TATTATGCTG GCTAATTTAT CATCACGATC TGAGTCACAC
GGTGAAGAAA TTAAGATGCG TTCTCATTTG AGAAATATTA ATTTATTTCA ACCCGGCTCT
TTTTGCCATC ATTGCAATGA GTCAATACCA ATAAAATATA ATATACCGAT ACTCGGTTGG
ATTTTTCTGC GTGGTGCCAG TCGTTGTTGT AATAAGAAGA TAAGCACCCG CTATCTATTT
ATTGAAGTAT TAGCTGTCAT TCAAACACTC TTGGTTCTTA TGATTTTTAA AGAGGACTTA
CTTATCTGCA CTAGCTTGGT GCTAATTTGG TCACTTACGG CATTGGCATT TATAGATTTC
GATACCTACC TCCTTCCTGA TTGTATGACA ATACCTTTGC TGTGGCTTGG TCTTCTTATC
AATATAGATA CGGTTTTTGC ACCACTAACC TCTGCAGTAC TGGGTGCTGT CAGTGGATAC
CTTTTTCTTT GGCTATCATA TTGGTTGTTT AAAATAGTTA GAGGTGTTGA TGGAATGGGC
TATGGTGATT TTAAATTAAT GGCCGCATTA GGTGCTTGGT TTGGTGTGAG TGCAGTACCT
TTTTTAATAT TGTTCTCTTC CTTTTTTGGT CTTGTCGCAT ATGCTATTTT TTATTTTTTT
GATAAAAAAG ATAATGGAAA AGAGATTAAT TACATCGCAT TTGGCCCTTA TATTTCATTG
GCGGGTGTTC TATACCTGTT TCTTGGGAGT CATGTGACTA ATTTATTTTC TTAA
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| Protein sequence | MQFFFVGYLI LGAMVGSFLN VLIYRLPIML ANLSSRSESH GEEIKMRSHL RNINLFQPGS
FCHHCNESIP IKYNIPILGW IFLRGASRCC NKKISTRYLF IEVLAVIQTL LVLMIFKEDL
LICTSLVLIW SLTALAFIDF DTYLLPDCMT IPLLWLGLLI NIDTVFAPLT SAVLGAVSGY
LFLWLSYWLF KIVRGVDGMG YGDFKLMAAL GAWFGVSAVP FLILFSSFFG LVAYAIFYFF
DKKDNGKEIN YIAFGPYISL AGVLYLFLGS HVTNLFS
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