Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0941 |
Symbol | |
ID | 5385305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 1125402 |
End bp | 1126568 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640863907 |
Product | putative tagatose-6-phosphate ketose/aldose isomerase AgaS |
Protein accession | YP_001399925 |
Protein GI | 153949282 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2222] Predicted phosphosugar isomerases |
TIGRFAM ID | [TIGR02815] putative sugar isomerase, AgaS family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCAAT ATTTAGGGTA CAGCCGGGAA GAACTGACTC GCTTACATGC CAGTTGGACC GCACAGGAAA TTGAACAACA GCCTGCATGT TGGGGAAAAA CACAGCGTAT TGTGGAAGAG AGTCAGGCAG CGATTAATGA TTTTCTGCAT CAGGCATTAG CCGCGAGTAA CACGCGGATT ATTTTTACCG GTGCTGGAAC CTCAGCCTTT GCCGGGCGGG CGCTGGCTCC GCTGTTAGCA CCTTATCTGT CCCATCGGAT TGAAGCGATT GCGACAACGG ATTTGGTGGC AACACCAGAA CAATATTTCT CCGAAGATAT TCCGACGCTG CTGGTTTCAT TTGCCCGTTC CGGCAACAGC CCGGAAAGTG TGGCTGCGTT ACAAGTGGCA TCGGCCTGTT TATCTCGCTG TTTCCACTTG GTATTGACCT GTAACCAGGG CGGCCAGTTA TATCAATATT GCCAGACGGC ACCAGGTGCA TTGGCCGTGC TGATGCCAGC AGAAACCAAT GACCAATCAC TGGCGATGAC CTCCAGTTTC TCCTCCATGA TGATGGCTGC GATGGCTATT TTTGCTGGAA TTGATAAGTA TTCGAAAGAA ATTGAAAGAT TTTGTAAGGG ATCTGCGGAT TGGTTCAAAG AAATTAATCA TAAAATCATC GATAATACTA AAAGTTCGCA ATACCAAAGG GTTATCTACT TAGGTAGTGG CGGACTACAG GGGCTGGCCC AAGAGTCAGC ACTGAAATTA CTCGAATTAA CCGCAGGTAA AGTTGTGGCT ACTTTTGATA CTCCGTTGGG ATTCCGCCAT GGTCCGAAAT CAATCGTTAA TCCGGACACT TTGGTTGTTG TTTACATCTC TAATGATCCC TACACGCGTC AATATGATCT CGACCTGTTA GCTGAGATCC GCGCCAACAA CGTTGCCGGT AAGGTTATCG CTATCGCAGC ACAATCAGAT GCTTATGTCA CAGCTGGTGA CCATGTTCTG GTACCTGGTA TGGCAGAAAG TTCTGACTTA GGCCTGCTGT TTGCCTATCT GATGTTTGCA CAATCCTTCG CTTTTCATAG CTCAGTTGCC TTAAACAACA CGCCGGATAG CCCATCTCCA ACGGGTGAAA TCAATCGCGT GGTGCAAGGT GTGACTATTT ATCCATTTAA AAAATAA
|
Protein sequence | MTQYLGYSRE ELTRLHASWT AQEIEQQPAC WGKTQRIVEE SQAAINDFLH QALAASNTRI IFTGAGTSAF AGRALAPLLA PYLSHRIEAI ATTDLVATPE QYFSEDIPTL LVSFARSGNS PESVAALQVA SACLSRCFHL VLTCNQGGQL YQYCQTAPGA LAVLMPAETN DQSLAMTSSF SSMMMAAMAI FAGIDKYSKE IERFCKGSAD WFKEINHKII DNTKSSQYQR VIYLGSGGLQ GLAQESALKL LELTAGKVVA TFDTPLGFRH GPKSIVNPDT LVVVYISNDP YTRQYDLDLL AEIRANNVAG KVIAIAAQSD AYVTAGDHVL VPGMAESSDL GLLFAYLMFA QSFAFHSSVA LNNTPDSPSP TGEINRVVQG VTIYPFKK
|
| |