Gene YpsIP31758_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0940 
SymbolagaV 
ID5384781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp1124887 
End bp1125384 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content51% 
IMG OID640863906 
ProductPTS system, N-acetylgalactosamine-specific phosphotransferase enzyme IIB component2 
Protein accessionYP_001399924 
Protein GI153949725 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID[TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCGGC CAAATATCGT CTGGACTCGT ATTGATGAGC GTTTACTTCA TGGACAGATC 
CGCATTACCT GGGGAAAGCA CACCGAAGCC AATTTAATTC TGGTGGCCAA TGATGACGCT 
GCCGATGGCC CAAACTCGGC TTTCATGCAG GCGGGAATGA AAGCCTCCGC TGGCGGTGAA 
TATGCAGTGC GCTTTTTCAG TATCCAGAAA ACAATTGATG TCATCCATAA AGCCTCTCCT 
CAGCAGAAGG TTTTCATTCT GTGTAACTCC CCGACGGATG TTGCGCGTTT GGTCGAAGGC 
GGTGTGCCAA TTACTCAGTG CAACGTGGGC AATATGCACT ACCACGACGG TAAACGTCAG 
ATTGCCAAAA CAGTCTCTGT GGATGAAAAA GATCTGGACG CTTTCCAACG TATGGCCGCG 
CTTGGCGTGG CCTGTACGGT GCAGAACACA CCAGACCAAA CGCCAATCAA TGTGATTGAG 
CTGGCCGCCA GGGCATAA
 
Protein sequence
MTRPNIVWTR IDERLLHGQI RITWGKHTEA NLILVANDDA ADGPNSAFMQ AGMKASAGGE 
YAVRFFSIQK TIDVIHKASP QQKVFILCNS PTDVARLVEG GVPITQCNVG NMHYHDGKRQ 
IAKTVSVDEK DLDAFQRMAA LGVACTVQNT PDQTPINVIE LAARA