| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0911 |
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| Symbol | rbsC1 |
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| ID | 5384721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1092223 |
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| End bp | 1093251 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640863877 |
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| Product | ribose ABC transporter, permease protein |
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| Protein accession | YP_001399895 |
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| Protein GI | 153948856 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATC CCCCCCCCTT GGTAATGTCT CTGACACGGA CCAGTAAATT CAGGAAGGCC
ATTCATCAAT ACGGGATCAT ACTTGCCTTT GTTGGCTTGT GTGCGGTCAT TGCTCTGGCT
GGTGAATTTG CAGTAAACAG CGGGACATGG AGCGAGAATT ATTTTTTATC ACGGGATAAT
ACACTCATTA TTCTACGCCA GGTCTCGATC AACGGCATCC TGGCCATTGG GATGACGTTC
GTTATTATCA CCGCGGGTGT TGATCTCTCC GTTGGCGCGG TTTTAGGCTT GGCCGGTATT
GTCGCCGCGC GTTTTGCGAC GAATAACAGT GCCATCGCCT TAGGGGGGAC CGATTGGCCA
CTGTTAGTAC CCATCGTGAT TGCCATTGGC ATCGGTTTAA TCTGCGGCGC TATCAATGGC
TTTATCTTAG GCAAATATCG TCTGCAACCC TTTATTGTCA CAATGGGGAT GTTATCTGTC
GCCCGTGGCC TGACATTACT GACTACTGGC GGAAACCCGG TATCACAATT AACCGATGAA
TTCCGTTGGT TAGGTAACGG TTATATTTTG GGTATTCCCG TACCGGTGTT GATCTTTATT
ATTCTGTTCG CCATTGCCTG GTTTGTCTTG AATAAGATGA CGTTTGGCCG TTACGTCTAC
GCGGTGGGCG GGAATGAAAA AAGTGCCCGC ACATCCGGGA TCAACGTATT ACGAATTAAA
GTGGCGGTAT ATACCCTTTG CGGTATTTTG GCGGCGATCG CGGGTTTAAT TTTAACCGCA
CGTACTGGCT CGGCACAAAC TGGCGCTGGC GTATCCTATG AATTGGATGC TATCGCGGCG
GTCGTTATTG GCGGCACCAG TATGGCTGGC GGTATTGGAA CTCTGCGCGG AACCTTATTT
GGTGTGCTGA TAATAGGTGT GATGAACAAT GGGCTTGATT TACTCGGCGT ACAATCCTAT
TACCAGCAAA TTATCAAAGG TGTTCTGATT GTCTTTGCTG TCATGCTTGA CCCATCCCGT
AAGCAATAA
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| Protein sequence | MSDPPPLVMS LTRTSKFRKA IHQYGIILAF VGLCAVIALA GEFAVNSGTW SENYFLSRDN
TLIILRQVSI NGILAIGMTF VIITAGVDLS VGAVLGLAGI VAARFATNNS AIALGGTDWP
LLVPIVIAIG IGLICGAING FILGKYRLQP FIVTMGMLSV ARGLTLLTTG GNPVSQLTDE
FRWLGNGYIL GIPVPVLIFI ILFAIAWFVL NKMTFGRYVY AVGGNEKSAR TSGINVLRIK
VAVYTLCGIL AAIAGLILTA RTGSAQTGAG VSYELDAIAA VVIGGTSMAG GIGTLRGTLF
GVLIIGVMNN GLDLLGVQSY YQQIIKGVLI VFAVMLDPSR KQ
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