Gene YpsIP31758_0855 details

Gene Information

• Locus tag: YpsIP31758_0855
• Symbol: rpiA2
• ID: 5387301
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 1034010
• End bp: 1034666
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640863819
• Product: ribose-5-phosphate isomerase A
• Protein accession: YP_001399839
• Protein GI: 153949354
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0120] Ribose 5-phosphate isomerase
• TIGRFAM ID: [TIGR00021] ribose 5-phosphate isomerase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.000367757
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCAGG ATGAACTTAA AAAAGCGGTG GGCTGGGCAG CATTAGATTA CGTTAAACCC 
GGTACGATTG TGGGTGTCGG CACGGGTTCA ACTGCGGCGC ATTTTATTGA CGCGCTAGGC 
TCGATTAAAC ATCAGATCGA AGGGGCTGTT TCCAGTTCTG ATGCTTCAAC CGCCAAGCTG 
AAAAGCTATG GTATCCCGGT ATTTGATTGT AATGACGTTG ATGTATTGGA TATCTATGTT 
GATGGTGCTG ACGAAATTAA CGGCCAAATG CAGATGATTA AAGGCGGTGG CGCAGCACTG 
ACCCGAGAGA AGATTATTGC GGCTATCGCC CGGAAGTTTA TCTGTATTGC TGATGAATCC 
AAACAAGTTG GTGTGCTGGG TAAATTCCCC CTGCCAGTCG AAGTGATCCC GATGGCCCGC 
TCTTATGTGG CGCGTGAGCT GATTAAATTG GGTGGTTTGC CTGAATACCG TCAGAATGTC 
CTGACCGATA ACGGTAACGT TATTCTGGAT GTCCACAACT TGAGTATTTT GGATGCTATC 
GCTTTAGAGA ACCAAATTAA TGGCATTGCC GGTGTCGTAA CGGTGGGGCT ATTTGCGAAT 
CGCGGTGCTG ATGTGGCCCT GATTGGTACG GCCAATGGCG TTAAAGTGAT TGGCTAA 

 

Protein sequence

MTQDELKKAV GWAALDYVKP GTIVGVGTGS TAAHFIDALG SIKHQIEGAV SSSDASTAKL 
KSYGIPVFDC NDVDVLDIYV DGADEINGQM QMIKGGGAAL TREKIIAAIA RKFICIADES 
KQVGVLGKFP LPVEVIPMAR SYVARELIKL GGLPEYRQNV LTDNGNVILD VHNLSILDAI 
ALENQINGIA GVVTVGLFAN RGADVALIGT ANGVKVIG