Gene YpsIP31758_0840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0840 
SymbolsprT 
ID5385797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1016513 
End bp1017025 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content48% 
IMG OID640863804 
Producthypothetical protein 
Protein accessionYP_001399824 
Protein GI153948783 
COG category[S] Function unknown 
COG ID[COG3091] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAC TAAGAATCCC TATCGCACTC CAACAAGCGG TTATGCAGTG TCTGCGTCAC 
TATTTGCAAC TGGCTAACCA GCATCTTGGC ACCGCGTATC CAGAGCCAAA AATCAATTAC
CATCAGCGTG GTACCAACGC AGGCAGTGCC TATCTGCAAT CATTCGAAAT TCGTCTTAAC
CCAGTGTTAT TGCTGGAGAA TAAGCAGCCG TTTATTGATG AAGTCGTACC ACATGAATTA
GCACACTTGC TGGTTTACCG CCAATTCGGC CGCGTAGCCC CCCATGGCAA AGAATGGCGC
TGGATGATGG AACAGGTCTT AAAAGTACCC GCCAGCCGCA CCCACCAATT CGAAGTGGCG
TCAGTGCGCA GTAAGACCTT CAATTATCAA TGCAAATGTC AGCAACATGC TTTAACCATT
CGCCGTCACA ATAAAGTGCT GCGAGGAGAG AGTGAATATC GCTGCCGGCA GTGTGGGGAG
AAACTCCAGT TCATCACAAT AAATCCTGAT TAA
 
Protein sequence
MSTLRIPIAL QQAVMQCLRH YLQLANQHLG TAYPEPKINY HQRGTNAGSA YLQSFEIRLN 
PVLLLENKQP FIDEVVPHEL AHLLVYRQFG RVAPHGKEWR WMMEQVLKVP ASRTHQFEVA
SVRSKTFNYQ CKCQQHALTI RRHNKVLRGE SEYRCRQCGE KLQFITINPD