Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0828 |
Symbol | |
ID | 5385429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 1006718 |
End bp | 1007272 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640863792 |
Product | YggT family membrane protein |
Protein accession | YP_001399812 |
Protein GI | 153947310 |
COG category | [S] Function unknown |
COG ID | [COG0762] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 0.52765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAACGC TGACTTTTCT GGCAAAAACG GTCATTGACC TATATGTGAT GGTACTGTTG TTGCGCATCT GGATGCAGTG GGTTCACAGT GATTTCTATA ATCCATTGTC TCAATTTGTG GTGAAAATAA CCCAACCTAT TGTTGGCCCA CTGCGCCGAG TGGTCCCCTC TCTGGGGCCA ATCGATAGCG CATCATTGCT GTTGGCATAT TTACTGGTGG CCATTAAGTA CCCACTCCTC TCACTGATTG GTCAAGGCTT CTTGTCACTC AGCATTGATC ACCTCTTTTT CGGCCTTATT GGGCTGGTAA AAGCAGTGGG TCACCTGATT TTCTGGGTCA TGATTATCCG TGCACTGATG AGTTGGATCA GTCAGGGCCG TAGCCCGGTA GACTACCTGC TGTTGCAGTT AACTGAACCA TTAATGGCAC CGATTCGTCG TATTTTACCT GCGATGGGGG GGATCGATTT CTCGGCAATG GTTGTCATTT TTATCTTGTA CCTGCTCAAT TCTTTAGCCA TGGAAACATT TGGGGCTATG TGGCTTTCGC TGTGA
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Protein sequence | MLTLTFLAKT VIDLYVMVLL LRIWMQWVHS DFYNPLSQFV VKITQPIVGP LRRVVPSLGP IDSASLLLAY LLVAIKYPLL SLIGQGFLSL SIDHLFFGLI GLVKAVGHLI FWVMIIRALM SWISQGRSPV DYLLLQLTEP LMAPIRRILP AMGGIDFSAM VVIFILYLLN SLAMETFGAM WLSL
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