| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0826 |
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| Symbol | rdgB |
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| ID | 5387739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1005738 |
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| End bp | 1006331 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640863790 |
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| Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
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| Protein accession | YP_001399810 |
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| Protein GI | 153948234 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.26724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAA TAGTATTAGC CACCGGCAAC CCCGGCAAAG TACGTGAACT GGCAAACCTG
CTGGCCGACT TTGGTTTGGA TGTCGTCGCA CAAACCGAAC TGGGTGTTGA GTCTGCAGAA
GAGACGGGCT TAACCTTTAT TGAAAACGCC ATTTTAAAAG CCCGCCATGC AGCGCAAACC
ACCGGTTTAC CGGCCATCGC CGATGATTCA GGCTTAGCAG TAGACGCGTT AGGCGGCGCT
CCGGGGATTT ATTCCGCACG CTATGCCGGT ACTGATGCCA GTGACCAAGA GAATCTGGAA
AAGCTGTTGG CCGCATTGCA AAATGTCCCC GAGGAAAAAC GCGGTGCTCA GTTCCATTGC
GTATTGGTCT ATATGCGTCA TGCTGAAGAT CCAACACCGC TGGTGTTCCA TGGCCAATGG
CCAGGGGTAA TTGCTCACCA ACCTGCTGGG GCTGCTGGGT TTGGCTATGA CCCTATTTTC
TATGTACCCG CGCTGGGTAA AACCGCAGCG GAACTGACAC GTGAAGAAAA GCACGCGGTA
TCCCATCGTG GTCAGGCCCT GAAATTGATG CTGGATGCGC TGCGCGATGC TTAA
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| Protein sequence | MQKIVLATGN PGKVRELANL LADFGLDVVA QTELGVESAE ETGLTFIENA ILKARHAAQT
TGLPAIADDS GLAVDALGGA PGIYSARYAG TDASDQENLE KLLAALQNVP EEKRGAQFHC
VLVYMRHAED PTPLVFHGQW PGVIAHQPAG AAGFGYDPIF YVPALGKTAA ELTREEKHAV
SHRGQALKLM LDALRDA
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