Gene YpsIP31758_0801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0801 
Symbol 
ID5384533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp963127 
End bp964212 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content56% 
IMG OID640863764 
Producthypothetical protein 
Protein accessionYP_001399785 
Protein GI153950870 
COG category[S] Function unknown 
COG ID[COG3520] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03347] type VI secretion protein, VC_A0111 family 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGAG AATCACACGA CCCGAATTCC CGGCTGATCA CTCGGCTTAA GCGGGATATC 
GGACAGATCA ATTTTTACCG CTTCTGTCAG TTGCTGGAGC AACAACCGGG AACCTTGCCG
CTGGGGAGTA CCAATAACCC GGCGGATGAT CCGGTGCGCT TTCGTCCGCA TCCGGGCATG
GGGTTCCCGG TCAGTGAGCT GAAGGCGCTG GAAACTGACC CGGATCAGCC TGATGCACCG
CTGACGGCGC GCACCACCTT TATGGGGTTG TACGGTGTGG ATTCTCCCCT GCCGACAGCT
TATATCGACG ATATTACGCA GCAGCGTGAG GGGCATGAGG CGCTGGAAGG GTTCCTCGAT
ATCTTCAACC ATCGCTTTAT GACGCAGTTT TATCGCATTT GGCGCAAATA TTCCTATCCG
GCCACTTTTG AGTCGGGCGG CAAAGATAAC ACCTCCCAAA GCCTGTTGGG GCTGATTGGC
ATGGGTATTC CCGGTTCGCA GCAGCATTTT GCCACCCCGA CATCACGCTT TCTGGCCCTG
CTGGGGGTGA TGCGTCAACC GGGGCGAACT GCCGAAGGGG TACAGGCACT GGTCCGACTG
CTGGCCCCCT TTACGCAGGC TGATGTGACG CCCCATTGCC TGCGTACGGT TCGTCTGACC
TCACAGATGA CATTTGCCGA CGAAGGGGGC AACTGGCTGG ACGGTTACAC CGTACTGGGC
GATGAGGCCA TCGATGCCAA CAGTCAGTTA TTGATTTCTC TGCAGACGGA AGATCGCGAC
GAGGCCGGTG ACTGGTTACC GGATGGCCCA TTGTATACCG ATTTTCTGGT GCTGTTGCGG
GTGTATCTGG GCTGGCGCTA TCGAGCCTGT ATTCAACTGA CTGTCGCAAC ACGGTTGCTG
CCGGCGTTGG TGTTGGATGA GACGCCGGTC AGGTTGGGAC TGACCGGGGT GCTGGGGCTG
GATGACGATA CGCTGTCAGA CGATATACCT GAATACTATA CCGTGGAACT GGGACACTAC
AGTGGACTGA CTCCACAGAA ATACCAAGAA GGAAACCGAC GTGTTAGCTA TTACTTCGAA
AAATAA
 
Protein sequence
MGRESHDPNS RLITRLKRDI GQINFYRFCQ LLEQQPGTLP LGSTNNPADD PVRFRPHPGM 
GFPVSELKAL ETDPDQPDAP LTARTTFMGL YGVDSPLPTA YIDDITQQRE GHEALEGFLD
IFNHRFMTQF YRIWRKYSYP ATFESGGKDN TSQSLLGLIG MGIPGSQQHF ATPTSRFLAL
LGVMRQPGRT AEGVQALVRL LAPFTQADVT PHCLRTVRLT SQMTFADEGG NWLDGYTVLG
DEAIDANSQL LISLQTEDRD EAGDWLPDGP LYTDFLVLLR VYLGWRYRAC IQLTVATRLL
PALVLDETPV RLGLTGVLGL DDDTLSDDIP EYYTVELGHY SGLTPQKYQE GNRRVSYYFE
K