Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0801 |
Symbol | |
ID | 5384533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 963127 |
End bp | 964212 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640863764 |
Product | hypothetical protein |
Protein accession | YP_001399785 |
Protein GI | 153950870 |
COG category | [S] Function unknown |
COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAGAG AATCACACGA CCCGAATTCC CGGCTGATCA CTCGGCTTAA GCGGGATATC GGACAGATCA ATTTTTACCG CTTCTGTCAG TTGCTGGAGC AACAACCGGG AACCTTGCCG CTGGGGAGTA CCAATAACCC GGCGGATGAT CCGGTGCGCT TTCGTCCGCA TCCGGGCATG GGGTTCCCGG TCAGTGAGCT GAAGGCGCTG GAAACTGACC CGGATCAGCC TGATGCACCG CTGACGGCGC GCACCACCTT TATGGGGTTG TACGGTGTGG ATTCTCCCCT GCCGACAGCT TATATCGACG ATATTACGCA GCAGCGTGAG GGGCATGAGG CGCTGGAAGG GTTCCTCGAT ATCTTCAACC ATCGCTTTAT GACGCAGTTT TATCGCATTT GGCGCAAATA TTCCTATCCG GCCACTTTTG AGTCGGGCGG CAAAGATAAC ACCTCCCAAA GCCTGTTGGG GCTGATTGGC ATGGGTATTC CCGGTTCGCA GCAGCATTTT GCCACCCCGA CATCACGCTT TCTGGCCCTG CTGGGGGTGA TGCGTCAACC GGGGCGAACT GCCGAAGGGG TACAGGCACT GGTCCGACTG CTGGCCCCCT TTACGCAGGC TGATGTGACG CCCCATTGCC TGCGTACGGT TCGTCTGACC TCACAGATGA CATTTGCCGA CGAAGGGGGC AACTGGCTGG ACGGTTACAC CGTACTGGGC GATGAGGCCA TCGATGCCAA CAGTCAGTTA TTGATTTCTC TGCAGACGGA AGATCGCGAC GAGGCCGGTG ACTGGTTACC GGATGGCCCA TTGTATACCG ATTTTCTGGT GCTGTTGCGG GTGTATCTGG GCTGGCGCTA TCGAGCCTGT ATTCAACTGA CTGTCGCAAC ACGGTTGCTG CCGGCGTTGG TGTTGGATGA GACGCCGGTC AGGTTGGGAC TGACCGGGGT GCTGGGGCTG GATGACGATA CGCTGTCAGA CGATATACCT GAATACTATA CCGTGGAACT GGGACACTAC AGTGGACTGA CTCCACAGAA ATACCAAGAA GGAAACCGAC GTGTTAGCTA TTACTTCGAA AAATAA
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Protein sequence | MGRESHDPNS RLITRLKRDI GQINFYRFCQ LLEQQPGTLP LGSTNNPADD PVRFRPHPGM GFPVSELKAL ETDPDQPDAP LTARTTFMGL YGVDSPLPTA YIDDITQQRE GHEALEGFLD IFNHRFMTQF YRIWRKYSYP ATFESGGKDN TSQSLLGLIG MGIPGSQQHF ATPTSRFLAL LGVMRQPGRT AEGVQALVRL LAPFTQADVT PHCLRTVRLT SQMTFADEGG NWLDGYTVLG DEAIDANSQL LISLQTEDRD EAGDWLPDGP LYTDFLVLLR VYLGWRYRAC IQLTVATRLL PALVLDETPV RLGLTGVLGL DDDTLSDDIP EYYTVELGHY SGLTPQKYQE GNRRVSYYFE K
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