| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0796 |
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| Symbol | |
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| ID | 5385509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 958005 |
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| End bp | 959609 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640863759 |
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| Product | ImpA domain-containing protein |
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| Protein accession | YP_001399780 |
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| Protein GI | 153949179 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACGT TAAATACCCT GATCACTGCC TGTGCCGCTG TCCCTGATTC ACTGTTATTA
AAGGCAGAAC AACAGGTTAC ACTTTGGGAT CGCTGGTTGC AGCCGGTGAC GACTGAACAG
CACAGCGGAG AAGACCTCAG TTACAATGAT GACTTCCAGC AGATGCGTGA AGAGGTCAAT
AAGCTCTCGG GTGCTGATAC CACGTTAGCC AGCGAGCTGG CAGAAAAACT GTTAACCCTG
CATGGCAAAG ATGTGCGGGT GGCAACCTAT TACATTTGGG CGCGTTTACA CCGTGATGGC
GAGGCTGGGC TGGCGGATGG ACTGGCACTG CTGGCCGGGC TTATCAGCCG TTTTGGTGAA
ACCCTGCATC CGTTGCGCGC AGCCAGTCGG AAAACTGCGC TGGAATGGCT ATCGAGTTCT
CGCGTGCTGG ACAGTTTGTC GCTCTATCCT GAAGTGGATA ATGCGGATTT TGAACGCATC
GTTGGCGCAC TGGCGTTAAT CGAACAGAGC CTCAGCGGCT GGGATGACGC ATCCCGTCCG
CAGTTTGGTG GATTGTATCT TGCCTTGGAA CATCGTCTGG CGCAGTCCGG TGGACCGAAT
GCGGTGGTGC CACAAAACAG CAGCGGGTCA TCATCGGCAG GGAGTCAGGG CCAGACGGCT
ATGGTTTCAC CGGAGTTGCG GCCAGTCCAG TCGGGGCGTG ACCTGCTCGA CCAGGCTAAA
ACGTTAGCAA AATACCTGCG GAACCAGCCG CAGGGATGGC TCTCCGGGCA TCATCTTATC
AAGAGCGTGC GCTGGGATAC GGTACACCAG TCACCGCCGT TGGATGTGAG TGGACGAACC
CGACTGGTAC CGCCGCGCCC GGAATATCGC GTGCTGCTTA AGCGTCTTTA TCTGCAACAA
AACTGGCTGG AGTTGTTGGA ACAGGCGGAA TCGATATTTG CCGAAGGGGT CAACCATTTC
TGGCTCGATG TGCAGTGGTA TCTGCATCAG GCACTCAGTA AAGCGGGAGC CCCATTCGAT
GGCTGGGCAG CTTGTATCAC CCAGGATTTA CGTCTGTTAC TGACCCGGCT GCCCGGTCTG
GAGGGGCTAT GCTGGAGTGA CGGCACGCCG TTTGCCGATG AGGTGACGCT GGGGTGGATA
AACCAGCAGG TGCTGGAGTC GGTGTCGGGC TGGGGCAGCG AGCCTGCCGC CGTGATGGCA
TCGGGCGAAG ATGACATTCT GTTGCTGGAG CCAGAAGCTC TGGCTCAGGC GGACAGTGAA
GGGATTGAAG CCGCACTTAA CTGGTTGCAA TCCCGTCCGG GTATTACCAC TGCCCGCCAT
CAGTGGCTGC TGCGTTTGGT GATGGCCCGC GTGGCGGAGC AGTACGGCAA GAACGATATG
GCACTGCATC TGCTTAGTGA ACTTGATAGC CGCGGTGCAT TGCTAACCTT GCCGCAGTGG
GAGCCGGGGC TGGCGTTTGA AGTCAAAGCC CGAAGTCTGA AGCTGCTGCG GATGAAAGCA
CAACGCAGCG ACAGTGAAAA AACCCGCCTG CATATCGAAA TGGAAAGCTT GCTCAGTGGG
CTTATGGCCC TCGACCCGGC CCGTGCGGCC GTATTATGCG GATAA
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| Protein sequence | MATLNTLITA CAAVPDSLLL KAEQQVTLWD RWLQPVTTEQ HSGEDLSYND DFQQMREEVN
KLSGADTTLA SELAEKLLTL HGKDVRVATY YIWARLHRDG EAGLADGLAL LAGLISRFGE
TLHPLRAASR KTALEWLSSS RVLDSLSLYP EVDNADFERI VGALALIEQS LSGWDDASRP
QFGGLYLALE HRLAQSGGPN AVVPQNSSGS SSAGSQGQTA MVSPELRPVQ SGRDLLDQAK
TLAKYLRNQP QGWLSGHHLI KSVRWDTVHQ SPPLDVSGRT RLVPPRPEYR VLLKRLYLQQ
NWLELLEQAE SIFAEGVNHF WLDVQWYLHQ ALSKAGAPFD GWAACITQDL RLLLTRLPGL
EGLCWSDGTP FADEVTLGWI NQQVLESVSG WGSEPAAVMA SGEDDILLLE PEALAQADSE
GIEAALNWLQ SRPGITTARH QWLLRLVMAR VAEQYGKNDM ALHLLSELDS RGALLTLPQW
EPGLAFEVKA RSLKLLRMKA QRSDSEKTRL HIEMESLLSG LMALDPARAA VLCG
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