| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0648 |
|---|
| Symbol | flgK |
|---|
| ID | 5385188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 755165 |
|---|
| End bp | 756526 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640863619 |
|---|
| Product | flagellar hook-associated protein FlgK |
|---|
| Protein accession | YP_001399640 |
|---|
| Protein GI | 153949847 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1256] Flagellar hook-associated protein |
|---|
| TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTA TTAAAACCGC ATTTAGCGGA ATGCAGGCAA CACAAGCGCA TTTAAATGCG
ACATCAATGA ATATTGCCAA TATTCATACT CCCGGCTACT CACGTCAGCG GGCTGAACAA
AGTGCGATTG GCGCGGACGG GCAGGGTGGA ATTAACGCAG GGAATGGGGT CAATGTTGAT
GCAATCAGAC GCCTTTCCAA ACAATATGTG GTTATGCAGG AGTGGCAGGC AAATAGCCAG
CAACAGTATT ACGAGGCAGG TGAACAATAT CTTAAAGCGG TAGAATTGAT GGTCTCCAAT
GAGAGCACCA GTCTGGCAAC GGGGTTAAAT AATTTCTTTT CCTCTCTCAG TGCGGCGACA
CAAATGCCTG ACTCAACACC CATGCGTCAG CAGATCATCG AATCGGCTAA TGCCATGGCG
CTACGTTTTA ATAATGTGAA TAACTTTATT GCTCAGCAAA AAAATTCTAT TGGGCAGCAA
CGTGATATCA GTATTAAAGA GATCAATAGC TTGACTCGCA GTATTGCTGA TTATAATCAA
CAGATCTTAA AGAATCGTTC TGACGGCAAT AATATTAACG ACTTATTGGA TAAGCAGGAA
CTCCAGATAA AAAAACTCAG TGGCTTAATA GAGACACAAG TTAATCAAGC TGAGGATGGC
ACTTACCGTG TTAGCGTGAA ACAAGGGCAG CCTTTAGTGA ATGGTGCTGT GGCGGCTGAA
CTGGCGGTTG ATACTCGCTC TGCTGATACT AAGATCAATA TCCATTTTTC GGGGACCACA
CAGGGTATGA ATATGTCATG TGGAGGTCAA TTGGGGGGAA TAAATGATTA TGAATTTACC
ACCCTGAAAA AATTACAGGC CTCTACTCAA GGGATGGCGA AAACGGTAGC CGATGAGTTC
AACACTCAGC TCAAACTTGG TAGTGATTTT ACTGGCGCTA ATGGGCGAGA CTTATTTGTC
TTTAATCCGG GTGATCCAAA TGGAATGTTA CAACTGTCAG CTATTACGGC GGAACAATTA
GCCTTGGCTG GTCGCGGTGA GCCTTCCGGC GATAGCAGTA ATCTATTTAA ACTGATTGAT
ATTAAACAAA AAAATGTTGT TGGCATGAAT AGTGTACGAT TAGATGATGC AGCGACCACG
TTAGTGGGCT ATATCGCCAT CACCAGTAAT AGAAATTACA GCGAATTGGA AAACGCCGAA
AACACCTTAA ATCAAGCTAC CCGGTATCGT GAAAGTATTA GTGGTGTAAA TAATGATGAA
GAAGCAATAA ATTTGATGGA GTATCAGCGG GCTTATCAAT CCAATATGAA AGTCATCGCG
ACCGGAGATA AATTATTCTC TGATCTTTTA GCTTTAATCT AA
|
|---|
| Protein sequence | MNFIKTAFSG MQATQAHLNA TSMNIANIHT PGYSRQRAEQ SAIGADGQGG INAGNGVNVD
AIRRLSKQYV VMQEWQANSQ QQYYEAGEQY LKAVELMVSN ESTSLATGLN NFFSSLSAAT
QMPDSTPMRQ QIIESANAMA LRFNNVNNFI AQQKNSIGQQ RDISIKEINS LTRSIADYNQ
QILKNRSDGN NINDLLDKQE LQIKKLSGLI ETQVNQAEDG TYRVSVKQGQ PLVNGAVAAE
LAVDTRSADT KINIHFSGTT QGMNMSCGGQ LGGINDYEFT TLKKLQASTQ GMAKTVADEF
NTQLKLGSDF TGANGRDLFV FNPGDPNGML QLSAITAEQL ALAGRGEPSG DSSNLFKLID
IKQKNVVGMN SVRLDDAATT LVGYIAITSN RNYSELENAE NTLNQATRYR ESISGVNNDE
EAINLMEYQR AYQSNMKVIA TGDKLFSDLL ALI
|
|---|
| |