Gene YpsIP31758_0642 details

Gene Information

• Locus tag: YpsIP31758_0642
• Symbol: flgE
• ID: 5385114
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 750070
• End bp: 751278
• Gene Length: 1209 bp
• Protein Length: 402 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640863613
• Product: flagellar hook protein FlgE
• Protein accession: YP_001399634
• Protein GI: 153948570
• COG category: [N] Cell motility
• COG ID: [COG1749] Flagellar hook protein FlgE
• TIGRFAM ID: [TIGR03506] fagellar hook-basal body proteins

Plasmid Coverage information

• Num covering plasmid clones: 51
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTTA GTATCGCTAA TACCGCATTG AATGCACATA CCGAACAGTT GAACACCATC 
AGTAACAATA TTGCCAACTC GGCAACCAAA GGTTTTAAAG CCAGCCGCAC TGAGTTTGCT 
TCTATGTATG CCCAGTCACA GCCACTGGGG GTCACGGTCA GCGGCGTGTC ACAAAATATC 
GGCAAAGACG GCCAAAAAGA CAAAACTGGC ATGGGGCTGG ATTTGGCGAT CAGCGGCGGC 
GGTTTCTTTG TGGTGCGTGA AAACTCGGGG GATAAGGCCT ATACCCGCGC GGGTATGTTT 
CGTTCTGATG TTGATGGTTA TTTGGTTAAC GGCCAAGGGA TGAAGTTGCA GGGCTACCCG 
GCAGATGACG CAGGTAATAT CCAGGCGGGC ATCATCAGTG ATTTGAAAAT TAACAATGCG 
GGTGTACCGG CTAAGGCTTC AACAAATCTT GACTTTATGG CCAATCTGGA AGCTGGAGCA 
ACGGTACCAT CAGTAACCAC TTTCAATGCG GGTGATCAAA ACAGTTACAA CTTCACCACC 
ACGTCGACGG TTTATGATTC TCTGGGGCGG GAGCACGCGG TTGCTCACTA TTTTATTAAA 
TCAGCGACGA CTACCTCTGC TGCACCGAAT CAATGGACGG TGCGCCATAG CATTGATGGC 
ACGGTGGCGA CTGCTCACCA TACATTGCAA TTCACCAATA CCGGGGCGCT GATACCGAGC 
AGTAGCGCCA AGCTTACCGG CACTTTCAAT CCAGCGGGTG CCGCTGATTA TGATATCGAT 
ATTGATTACA CCGGCACCAC GCAGCTTAAC CAAGGGTTTA CCACCACTCG CAATAAAAGT 
GATGGTTATA CCTCGGGTGT TAAAAATGGT GAACGGATTG AAAGCGACGG CTCGGTGTAT 
GCCACTTTCA GTAATGGCGA AAGAATGTTG CAGGGCAAAG TGGTTCTCGC GAACTTCGCC 
AGCCCAAGTG GCCTGGTGAC GCAAAATGGC ACGAGCTGGA GCGAAAGCAA TAAATCTGGT 
GCGGCGTTGT TAGGGACACC CGGTACGGGG TTATTGGGTA GCCTTGAATC AGGCGCGTTA 
GAAAATTCCA ATGTGGATAT CACCGCAGAA CTGGTAGGGC TGATGACCGC CCAGCGTAAC 
TATCAGGCCA GCACCAAAAT CATCAGCACC AATGACAGCA TGATGAATGC GCTGTTCCAG 
GTGCTGTAA 

 

Protein sequence

MSFSIANTAL NAHTEQLNTI SNNIANSATK GFKASRTEFA SMYAQSQPLG VTVSGVSQNI 
GKDGQKDKTG MGLDLAISGG GFFVVRENSG DKAYTRAGMF RSDVDGYLVN GQGMKLQGYP 
ADDAGNIQAG IISDLKINNA GVPAKASTNL DFMANLEAGA TVPSVTTFNA GDQNSYNFTT 
TSTVYDSLGR EHAVAHYFIK SATTTSAAPN QWTVRHSIDG TVATAHHTLQ FTNTGALIPS 
SSAKLTGTFN PAGAADYDID IDYTGTTQLN QGFTTTRNKS DGYTSGVKNG ERIESDGSVY 
ATFSNGERML QGKVVLANFA SPSGLVTQNG TSWSESNKSG AALLGTPGTG LLGSLESGAL 
ENSNVDITAE LVGLMTAQRN YQASTKIIST NDSMMNALFQ VL