| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0599 |
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| Symbol | |
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| ID | 5384821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 702724 |
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| End bp | 704010 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640863571 |
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| Product | type II/IV secretion system protein |
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| Protein accession | YP_001399592 |
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| Protein GI | 153947398 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGTCC CTTTAAAAAT ACAAGAGTTA ATGCGCGAAA GAATGTTAGC CAATATTGAC
ATTAATAAAG TTGAACTCCT GGTTGGTGAT CGTAACAAAC TCATCGGATT GCTCTCTCAA
ACATTCGATG ATTTATTTAA TAATAATGAA TATAACTTAA CGACTCAAGC ACAAAAATAT
ATTATTGAAA TGATAGCTGA TGAAATAACC GGCTTTGGCC CATTAAGAGA ACTTATGGAG
GATGATTCCA TTAGTGATAT TATGGTCAAC GGCCCAGAAA GGATATTCAT CGAAAGATAT
GGCCTGTTAA AATTAACTGA CCGGCGGTTT GTTAATAATA CTCAGCTCAC CGATATCGCA
AAGCGTTTAA TGCAAAAGGT TAATAGACGC ATTGATGAAG GCCGCCCATT AGCAGATGCC
CGTTTAATCG ATGGTAGCCG AATAAACGTC GCGATCAGCC CCATTGCTTT AGATGGTACC
GCCCTTTCTA TCCGTAAATT CAGTAAAAAT AAACGGAGAT TAGAAGATTT GGTCGATATG
GGAGCCATGA GTAGTGATAT GGCAAATTTC CTAATTATTG CTGCCAGTTG CCGCGTAAAT
ATTATTATTT CCGGAGGTAC AGGCTCAGGG AAAACCACGC TATTGAATGC GCTTTCAAAA
TATATTTCAG AAGATGAGCG GGTGATAACA CTCGAAGATG CTGCGGAACT GAATCTGGAG
CAGCCCCATG TGGTCAGGAT GGAAACCCGT CTGGCGGGGC TGGAGAATAC TGGCCAGATA
ACCATGCGCG ATCTGGTGAT TAACTCCCTG CGTATGCGCC CTGACAGGAT CATTATTGGT
GAGTGCCGGG GTGAGGAAAC CTTTGAAATG TTACAGGCGA TGAACACTGG CCATAACGGT
TCAATGTCCA CCCTACATGC CAATACTCCC CGTGATGCTG TTGCCCGTTT AGAAAGCATG
ATTATGATGG GGCCGGTTAA TATGCCTCTC ATTACCATCC GCCGTAATAT TGCATCTGCA
ATTAATCTTA TTGTCCAAGT CTCACGTATG AATGATGGCT CGCGAAAAAT TCGCAATATC
AGCGAGATCA TGGGAATGGA AGGTGAACAT GTTGTTTTGC AAGATATATT TACTTTCCAA
CCCGCCAGTA CTCGTGATGA TCAAGGGCGT ATTCAGGGTG AGTTTATCAA CCATGGGCTA
TTTAATCGGT CATCAGTCAG AATAAACGCC GATATCCACA ATCTGGCCAA TGAGTTAAAC
AGTGTTTTCT CTACGGTGAG CAAATGA
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| Protein sequence | MIVPLKIQEL MRERMLANID INKVELLVGD RNKLIGLLSQ TFDDLFNNNE YNLTTQAQKY
IIEMIADEIT GFGPLRELME DDSISDIMVN GPERIFIERY GLLKLTDRRF VNNTQLTDIA
KRLMQKVNRR IDEGRPLADA RLIDGSRINV AISPIALDGT ALSIRKFSKN KRRLEDLVDM
GAMSSDMANF LIIAASCRVN IIISGGTGSG KTTLLNALSK YISEDERVIT LEDAAELNLE
QPHVVRMETR LAGLENTGQI TMRDLVINSL RMRPDRIIIG ECRGEETFEM LQAMNTGHNG
SMSTLHANTP RDAVARLESM IMMGPVNMPL ITIRRNIASA INLIVQVSRM NDGSRKIRNI
SEIMGMEGEH VVLQDIFTFQ PASTRDDQGR IQGEFINHGL FNRSSVRINA DIHNLANELN
SVFSTVSK
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