Gene YpsIP31758_0592 details

Gene Information

• Locus tag: YpsIP31758_0592
• Symbol: exbD
• ID: 5385832
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 697133
• End bp: 697564
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640863564
• Product: biopolymer transport protein ExbD
• Protein accession: YP_001399585
• Protein GI: 153947381
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0848] Biopolymer transport protein
• TIGRFAM ID: [TIGR02803] TonB system transport protein ExbD, group 1

Plasmid Coverage information

• Num covering plasmid clones: 66
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAATGC GAATGAATGA TTCCCTCGAC GAGAGTGGAG AATTACACGA AATTAACGTG 
ACGCCGTTTA TTGATGTCAT GTTGGTGCTG CTGATTATCT TTATGGTCGC CGCGCCGTTG 
GCAACGGTAG ATATCAAAGT GGATCTACCT GCATCTTCGG CAGTACCGCA GCCGCGGCCA 
GAGAAACCAG TATTCTTGAC GGTTAAAGCG GATAACCAGC TTTATGTCGG CGACCAGCCA 
GTTGACCGTG AAACATTAGC CACGGCACTG GACAAAGTGA CCCAATCCAA TAAAGAAACC 
ACGATTTTCT TCCAAGCAGA TAAAGTGGTG GATTATGAAA CCTTGATGAG CGTGATGGAT 
GCGCTACGTA AATCAGGCTA TCTCAAAGTT GGGTTAGTGG GTATGGAAGC AGGGTCCAGC 
GGCGCAAAAT AA 

 

Protein sequence

MAMRMNDSLD ESGELHEINV TPFIDVMLVL LIIFMVAAPL ATVDIKVDLP ASSAVPQPRP 
EKPVFLTVKA DNQLYVGDQP VDRETLATAL DKVTQSNKET TIFFQADKVV DYETLMSVMD 
ALRKSGYLKV GLVGMEAGSS GAK