Gene YpsIP31758_0532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0532 
Symbol 
ID5388431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp629276 
End bp631459 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content58% 
IMG OID640863503 
Productputative periplasmic beta-glucosidase 
Protein accessionYP_001399525 
Protein GI153948774 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACTG TTTATCGCGA TGCCACTCTG CCCATTGAGG CTAGAATTGA CGATTTGCTC 
AGCCAGATGA CGTTGGCGGA GAAAGTGGGC CAACTGTGTC AACAGCCGAT GCTGGACTAT
CAGCAACACC GTGACGACTA TCTTGCCGGG GTACGCGCTG GCCGCTGGGG TTCACGCATT
CTGGCTGATA CCGCCTGGGC GGGCAATGCG CCAGGAGAAA ACGTCGATCC GTGCCAGTTA
AATGAAATCC AACGTGCCGC CGTAGAGCAC AGCCGCCTGG GTATTCCGCT GTTGTTTGCC
CGTGACGTGA TTTACGGGCA GGCGACGGTG CTGCCGATAC CCCTGGCGCA GGCGGCTTCC
TGGAACCCCG AGCTGGTACA GCAGGCCTAC CGCGTTATCG CCCGCGAGGC GGCTTCGTTA
GGTATCCACT GGACCTTCGC CCCGATGCTG GATATTGCGC GCGATCCGCG CTGGGGGCGA
ACCATCGAAA CCAGTGGGGA AGATCCCTGG CTCACCGCGC AGTTCGCCGC CGCTGTCGTC
AAAGGATTTC AAGGGGACGA TCTCAGCGCC GCCGATAGCC TGATGGCTTG TGCCAAGCAC
TTTGTCGGCT ATGCCGCCGT GGAGGGGGGC CGCGACTACG ATACCACCGA GCTGTCCGAC
AACACGCTGC ACAATGTGCA TCTGCCGCCA TTCCAAGCGG CGATAGAGGC AGGCGTTGGC
TCGGTGATGA CCGGTTTTTG CGATCTCGGC GGTACGCCGG TCACTGCACA TGGTGAACTG
ATACGCGGTT GGCTGAAACA GCAGCAGAAC TTTGACGGCC TGGTGATCAG CGATTGGGGT
TCGATTGCGG ATCTGACTCA CTTTGGTATT GCTCAAGATG CACTGAGAGC AGCAGAATTG
GCGCTGCAGG CCGGTGTCGA TATGGCCATG ACCCATGAGG CCTATGAAGA TAAGCTGGAT
CAACTGGTGT TACAGGGGCG GATCAAGGAA GCGTTGCTGG ATGACGCAGT GCGTCGGGTG
CTACGCGCCA AGTTCCGCTG TGGCCTGTTT GAACGCCCTT ATGTTGATGA AGAGTGGCAT
AAGCGCGAGC TGCGCCGTCC TGAGCATCTG GCTCTGGCAC AGCGGTTGGC AGAGCAGTCG
ATCGTACTGC TGAAAAACCG GCAGGCGCTG CTGCCAATCT CCAGAACATC CGTACCACTG
ACGCTGGCGG TGATCGGCCC ACACGCCCAT TCGCAGCGCC AGCATCTTGG CTCCTGGTGT
CTGGACGGCG ACGCCGACCA AGTGATGTCG ATCTATCAAT CCCTCTGCGC TATCGCAGGG
GAGGTTAAGG TGATTACTGA GCAGAGTAGT TTTAGCGATG AGATGATCGA ATGTGCCCAT
CGGGCCGATA TCGTTATTCT CTGTACCGGC GAGAGCCACC GCCGCACTGG TGAAGCGCGC
AATATCGCCG AACTTCAGCT ACCGCCGGGA CAGGAAGAGT TGATCGCTGC GGTCGGGCGC
ACCGGTAAAC CGCTGGTGGT AATCCAGTGC ACTGGCCGCC CGTTACCATC ACCAGCAACC
GAGCAGTACG CCGATGCGCT GTTATATGGC TGGCAGTGCG GTAGTGAAGC GGGTAAGGCG
ATCGCTCGCA TTATTTTCGG CGAACAGGTT CCCTGTGGCA AATTACCGAT GACGGTGCCA
CGTAGTACCG GTCAGATCCC GATTTATTAT GGCCGCAAGC CACTGGGTAA AATGCGCGAC
TATCGTGAAT ATCAGCCCTA TAAAGATCTG GCGGATACAC CGCTGTATCC CTTTGGTTTT
GGCCTGAGTT ATACCCGATT TACCTATAGC GATTTGCAGT TGAGCCATGA ATCACTCGAA
CTGGGAGCAT CGCTACGGGT GACAATGACC GTCACCAACG ATGGTGCAGT GGCTGGGGAT
GAGGTTGTAC AGTGCTATAT TCGCCAGTAC GTCGCCAGCA CCACGCGGCC ACAGCGTGAA
CTGAAAGGTT TCCAACGTAT CAGCCTGCAG CCGGGGGAAT CGGGCGAGGT CAGCTTCACG
CTGGGAGTGC GCGAGCTGGC ATTTTACGGC CAACATCGCC GCTATGCGCA GGAGCCGTCG
CGTATCAGCG TATTTGTCGG TGGCGACTCA ACGACGCCAC ATCAGGCGGA TTTTACGCTG
TTTGAAAATC TTTACACTGT TTGA
 
Protein sequence
MSTVYRDATL PIEARIDDLL SQMTLAEKVG QLCQQPMLDY QQHRDDYLAG VRAGRWGSRI 
LADTAWAGNA PGENVDPCQL NEIQRAAVEH SRLGIPLLFA RDVIYGQATV LPIPLAQAAS
WNPELVQQAY RVIAREAASL GIHWTFAPML DIARDPRWGR TIETSGEDPW LTAQFAAAVV
KGFQGDDLSA ADSLMACAKH FVGYAAVEGG RDYDTTELSD NTLHNVHLPP FQAAIEAGVG
SVMTGFCDLG GTPVTAHGEL IRGWLKQQQN FDGLVISDWG SIADLTHFGI AQDALRAAEL
ALQAGVDMAM THEAYEDKLD QLVLQGRIKE ALLDDAVRRV LRAKFRCGLF ERPYVDEEWH
KRELRRPEHL ALAQRLAEQS IVLLKNRQAL LPISRTSVPL TLAVIGPHAH SQRQHLGSWC
LDGDADQVMS IYQSLCAIAG EVKVITEQSS FSDEMIECAH RADIVILCTG ESHRRTGEAR
NIAELQLPPG QEELIAAVGR TGKPLVVIQC TGRPLPSPAT EQYADALLYG WQCGSEAGKA
IARIIFGEQV PCGKLPMTVP RSTGQIPIYY GRKPLGKMRD YREYQPYKDL ADTPLYPFGF
GLSYTRFTYS DLQLSHESLE LGASLRVTMT VTNDGAVAGD EVVQCYIRQY VASTTRPQRE
LKGFQRISLQ PGESGEVSFT LGVRELAFYG QHRRYAQEPS RISVFVGGDS TTPHQADFTL
FENLYTV