| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0422 |
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| Symbol | gabD |
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| ID | 5385028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 500065 |
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| End bp | 501534 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640863391 |
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| Product | succinate-semialdehyde dehydrogenase (NADP+) |
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| Protein accession | YP_001399415 |
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| Protein GI | 153948849 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCAC AAAATCCTTT ACAACATCAA CGACAGCACG ACGGTATATA CCACATTGGC
TATTTTGTCG GTGGAAAATG GTCTCAGGCA CAGGAGCAAT TTGACGTCTG CAACCCGGCA
ACCGGCGAGC TGGTCGCCAG AGTGGCTAAA TCCGGTAAAC AAGAAACCGA AGCGGCGATT
AAAGCTGCCA GCGAGGCTTT CCCTGCCTGG CGAAAAACGC CCGCTAAACA GCGAGCAGAG
ATTTTACAGC GTTGGTATTT GCTGATAATG GAACATCAGC AATCATTGGC AGAGCTGATG
GTCTCCGAGC AAGGTAAACC CTTAAAAGAA GCCTTGGTTG AAGTGGCTTA TGCCGCCAGT
TTTATCCAAT GGTTTAGTGA GCAGGCCAAG CGGGCTAACG GTGAAATTAT CCCGTCAGCC
AAAGAGGGCG CACGTATCCT GGCGACCCGC GAACCGATTG GTGTGGTAGC CGCTATCACA
CCGTGGAATT TCCCGCTCGC GATGCTCACC CGCAAACTGG GGCCAGCACT GGCCGCCGGT
TGTACCGGGC TGATTAAACC TGCCAATAAC ACGCCATTAT CTGCCTTCGC CTTACTGGCA
CTGGCAGAAC AGGCTGGCGT GCCAGCTGGG GTACTCAATG GTGTCGTGGG GGATACTCAT
GCTATCAGCG ACGCGATTAT GGCCAGTTCA GACGTGCGTA AAATCTCTTT TACCGGCTCA
ACCAATGTCG GTAAGACGCT GATGCGCAAT GCTGCTGCAA CCATGAAGAG AATTTCGATG
GAGCTGGGCG GTAACGCGCC TTACATCGTT TTTGATGATG CCGATTTAGA GGCGGCGGTC
GCCGGGGCTA TGGCGTGTAA ATTCCGTAAT GCCGGGCAGG TGTGTGTGTG CGTCAATCGC
TTCTATATTC AGGATGCTAT CTACGACGAG TTTGTTAACC GCTTGGCTGC CGAGGTGAAA
AAACTGAAGG TCGGCAACGG GATGGATAAA GACGTCAACA TGGGGCCGTT GATTAATTTG
GCTGGTCTGG AGAAAGTAGA AGAGCACGTA AAAGATGCGC TTGAGAAGGG GGGGCGTCTT
TTAGCGGGGG GGCATCGCCA TGCGCTGGGC GGTAATTTCT TCCAGCCAAC GGTGATTGCA
GATGCCAATG AGCAGATGAA AGTGGCCTCG GAAGAGACAT TTGGCCCGCT GGCCGCCTGC
TTCCGTTTCA GCACTGAAGC CGAAGTGATT CAACGGGCCA ATAATACGCC ATTTGGGCTG
GCGGCCTATT TCTATACGCA GAACTTGCAA CGGGTGTTCC GCGTTTCAGA GGCGTTGGAA
AGCGGTATGA TTGGCGTCAA TGAATGCTCG GTTTCGACCG AGTTGGCCCC TTTCGGTGGT
GTTAAAGAGT CTGGCCTAGG TCGTGAAGGT TCGGTGCTGG GGTTGGATGA ATTTATGGAA
GTGAAAACCC TGCATTTGGG TAACTTGTAG
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| Protein sequence | MPAQNPLQHQ RQHDGIYHIG YFVGGKWSQA QEQFDVCNPA TGELVARVAK SGKQETEAAI
KAASEAFPAW RKTPAKQRAE ILQRWYLLIM EHQQSLAELM VSEQGKPLKE ALVEVAYAAS
FIQWFSEQAK RANGEIIPSA KEGARILATR EPIGVVAAIT PWNFPLAMLT RKLGPALAAG
CTGLIKPANN TPLSAFALLA LAEQAGVPAG VLNGVVGDTH AISDAIMASS DVRKISFTGS
TNVGKTLMRN AAATMKRISM ELGGNAPYIV FDDADLEAAV AGAMACKFRN AGQVCVCVNR
FYIQDAIYDE FVNRLAAEVK KLKVGNGMDK DVNMGPLINL AGLEKVEEHV KDALEKGGRL
LAGGHRHALG GNFFQPTVIA DANEQMKVAS EETFGPLAAC FRFSTEAEVI QRANNTPFGL
AAYFYTQNLQ RVFRVSEALE SGMIGVNECS VSTELAPFGG VKESGLGREG SVLGLDEFME
VKTLHLGNL
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