| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0396 |
|---|
| Symbol | |
|---|
| ID | 5387831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 455223 |
|---|
| End bp | 456200 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640863365 |
|---|
| Product | putative quinone oxidoreductase, YhdH/YhfP family protein |
|---|
| Protein accession | YP_001399389 |
|---|
| Protein GI | 153950922 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGCAC TGATACTTGA GCAAATTGAA GGGCGTACCA CCGCAGAAGT ACGTCAAATT
TCGGCCTCAC AACTGCCTGC GGGTAATGTC ACCGTAGATG TCAATTGGTC CAGCCTGAAT
TATAAAGATG CGTTGGCGAT TACGGGGCAA GGGAAGATTA TTCGCCAGTT TCCGATGGTA
CCGGGTATTG ATTTCGCCGG CACAGTACAC AGCAGCGAAG ATCCACGTTT TCATATCGGC
CAATCGGTCT TATTAACCGG TTGGGGAGTA GGTGAAAACC ATTGGGGAGG ACTCGCCGAG
CAAGCGCGAG TGAATGGCGA CTGGCTTGTC CCCATGCCAG ACGGACTGGA TGCACGTAAA
GCGATGATTA TTGGTACCGC AGGTTTTACC GCCATGCTGT GCGTCATGGC ACTGGAAGAC
GGTGGTGTGA CCCCGAAAAG CGGTGAAGTG GTGGTAACCG GGGCCAGTGG TGGCGTTGGT
AGCACAGCAA TTGCCTTGCT TTCAGCGTTA GGCTACCAGA TTGCCGCTAT TTCTGGCCGC
GACAGCAACA GTGACTATCT AAAGAACTTG GGCGCACAAC GGATATTACC GCGCAGTGAT
TATCTTGATG CTTCACGACC ACTGGAAAAA CAGCTCTGGG CAGGGGCGAT TGATACTGTG
GGTGATAGCA TGTTGGCCAA AATACTGGCC CAGATGAATT ATAACGGTAC CGTCGCGGCG
TGTGGCCTGG CAGGCGGTTA TAATCTGCCA ACCACCGTCA TGCCATTTAT TCTGCGTAAT
ATTCGCCTAC AGGGCGTGGA TTCAGTGATG ACACCACAAC CTCGCCGTCT ACAAGCCTGG
CAGCGATTAC AGAAAATTTT GCCTGAAAGT TTCTATCAGC AAGCATCACA AGCCATCACG
CTGGCTGATA CGCCCACGAT TGCGGCCAGG TTACTGGCAA ATGAAGTCAC CGGGCGTACC
TTAGTCAAAG TCCGCTGA
|
|---|
| Protein sequence | MRALILEQIE GRTTAEVRQI SASQLPAGNV TVDVNWSSLN YKDALAITGQ GKIIRQFPMV
PGIDFAGTVH SSEDPRFHIG QSVLLTGWGV GENHWGGLAE QARVNGDWLV PMPDGLDARK
AMIIGTAGFT AMLCVMALED GGVTPKSGEV VVTGASGGVG STAIALLSAL GYQIAAISGR
DSNSDYLKNL GAQRILPRSD YLDASRPLEK QLWAGAIDTV GDSMLAKILA QMNYNGTVAA
CGLAGGYNLP TTVMPFILRN IRLQGVDSVM TPQPRRLQAW QRLQKILPES FYQQASQAIT
LADTPTIAAR LLANEVTGRT LVKVR
|
|---|
| |