Gene YpsIP31758_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0393 
SymbolaroQ 
ID5387718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp452566 
End bp453018 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content48% 
IMG OID640863362 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001399386 
Protein GI153947079 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.321883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGATA AGTTTCACAT TTTGCTTCTG AATGGCCCTA ACTTGAATCT GCTTGGAACG 
CGTGAACCAG AAAAGTATGG TTACACCACC TTAGCTGAAA TTGTCAGTCA GTTAGAGATT 
CAGGCTCAGG GAATGGATGT CGCGCTTTCC CATTTGCAGT CAAATGCAGA ACATGCGCTG 
ATCGATAGCA TTCACCAGGC ACGGGGTAAT ACCGATTTTA TCCTGATTAA CCCAGCAGCG 
TTTACGCATA CCAGCGTGGC ACTGCGTGAT GCGTTGCTAG GCGTGCAGAT CCCGTTTATC 
GAGATCCACT TGTCTAACGT GCATGCCAGG GAGCCTTTCC GTCATCATTC ATATCTCTCC 
GATATCGCGG TTGGCGTAAT CTGCGGACTT GGCGCAGATG GCTACAACTT TGCTTTACAG 
GCAGCGGTAA ATCGCTTGTC AAAATCCAAC TAG
 
Protein sequence
MSDKFHILLL NGPNLNLLGT REPEKYGYTT LAEIVSQLEI QAQGMDVALS HLQSNAEHAL 
IDSIHQARGN TDFILINPAA FTHTSVALRD ALLGVQIPFI EIHLSNVHAR EPFRHHSYLS 
DIAVGVICGL GADGYNFALQ AAVNRLSKSN