| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0389 |
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| Symbol | panF |
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| ID | 5384913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 447290 |
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| End bp | 448744 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640863358 |
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| Product | sodium/panthothenate symporter |
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| Protein accession | YP_001399382 |
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| Protein GI | 153949794 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4145] Na+/panthothenate symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02119] sodium/pantothenate symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00229851 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACTG ATGTCGTTCT GCCGTTAGTC GGCTATCTGG TGTTGGTCTT TGGCTTATCT
ATTTATGCTT ATACGCGCCG CCAAACCGGG AATTTTCTCA ACGAATATTT TATCGGCAAC
CGTTCGATGG GCGGTTTTGT ATTGGCGATG ACCCTGACCG CCACCTATAT CAGCGCCAGC
TCGTTTATTG GTGGACCAGG TGCCGCTTAT AAATACGGCC TTGGCTGGGT CTTACTGGCG
ATGATCCAAT TGCCTGCGGT CTGGCTTTCC CTCGGTGTCT TAGGCAAAAA GTTTGCCATT
CTGGCGCGTC GCTATAATGC CGTGACCCTC AACGATATGT TGTATGCCCG TTATCAGAGC
CGTTTACTGG TTTGGCTGGC CAGTATCAGC CTGCTGGTGG CTTTTGTCGG TGCCATGACC
GTGCAATTTA TTGGTGGCGC ACGGTTGTTA GAAACGGCGG CGGGGATCCC TTACGACACT
GGCTTATTGA TTTTTGGTAT CAGTATCGCC CTGTACACCT CGTTTGGTGG CTTCCGGGCC
AGTGTCTTGA ATGATGCCCT GCAAGGGTTA GTGATGCTGA TCGGCACCAT TTTACTGTTA
GTCGCGGTGA TCCACGCGGC AGGTGGCCTA CACAAAGCCG TCGAAACGCT GCAACATATC
GATCCGGCGC TGGTTTCCCC CCAAGGCGGC GATCAGATCC TCGACGTGCC ATTTATGGCT
TCGTTCTGGA TCCTGGTCTG TTTTGGGGTG ATTGGTCTGC CACACACCGC CGTACGTTGT
ATTTCGTATC GTGACAGTAA AGCGGTTCAT CGCGGTATTA TCCTCGGCAC CATCGTGGTG
GCGATCCTAA TGTTCGGTAT GCACCTGGCT GGCGCACTGG GGCGGGCGGT GTTACCAGAT
CTGAAAATTC CAGATCAAGT AATCCCGACA CTGATGATCA CCGTACTACC GCCATTTGCT
GCGGGGATAT TCCTGGCAGC ACCGATGGCG GCGATCATGT CGACCATCAA TGCCCAGTTA
CTGCAATCTT CTGCTACCAT CGTGAAAGAT TTGTATCTCA ATCTGTGGCC AGCAGAGTTA
AAGAATGAGC GCAAGCTGGC ACGTATCTCC AGCTTATCCA CACTCATTCT TGGGCTATTA
TTGCTCTTGG CCGCCTGGCG ACCACCTGAA ATGATTATCT GGTTGAACCT ACTGGCCTTT
GGCGGACTGG AAGCGGTATT CCTCTGGCCA TTGGTATTGG GATTATACTG GGAGCGAGCC
AATGCCCACG GCGCTCTTAG CGCCATGATC GTCGGTGCGG TATGCTATAC GGTATTAGCC
AGCTTCGACA TCAAGATAGC CGGCCTGCAC CCCATTGTGC CGTCACTTAC ACTTAATCTG
TTGGCGTTTT ATATCGGTAA TCTGTTTGGC GACAGAGCGC GGGCGCGACA CCCCGCCATC
GTCAGTGCCG ATTAA
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| Protein sequence | MQTDVVLPLV GYLVLVFGLS IYAYTRRQTG NFLNEYFIGN RSMGGFVLAM TLTATYISAS
SFIGGPGAAY KYGLGWVLLA MIQLPAVWLS LGVLGKKFAI LARRYNAVTL NDMLYARYQS
RLLVWLASIS LLVAFVGAMT VQFIGGARLL ETAAGIPYDT GLLIFGISIA LYTSFGGFRA
SVLNDALQGL VMLIGTILLL VAVIHAAGGL HKAVETLQHI DPALVSPQGG DQILDVPFMA
SFWILVCFGV IGLPHTAVRC ISYRDSKAVH RGIILGTIVV AILMFGMHLA GALGRAVLPD
LKIPDQVIPT LMITVLPPFA AGIFLAAPMA AIMSTINAQL LQSSATIVKD LYLNLWPAEL
KNERKLARIS SLSTLILGLL LLLAAWRPPE MIIWLNLLAF GGLEAVFLWP LVLGLYWERA
NAHGALSAMI VGAVCYTVLA SFDIKIAGLH PIVPSLTLNL LAFYIGNLFG DRARARHPAI
VSAD
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