| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0347 |
|---|
| Symbol | |
|---|
| ID | 5384886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 408189 |
|---|
| End bp | 409055 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640863315 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001399339 |
|---|
| Protein GI | 153949727 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGAA CGCAGGTCGT GGCGAACTGG TATCGAGAGT CGGATGAGTT TTCGACGTTG
GTGAACTACC GGATTCTGCG TGCGGGTCAT ATTCGTGCAG CCGATAATTT TCATGTACGC
CGTCAGTCTG TTGCCGGTCA CGAATTGATT TTTTGTCTCA ATGGTAGTGG ATTTATCCGC
CTGGAAAATA ATCTTCATGA AGTTAAAAAG GGCAATCTCG CTTGGTTACC TGTCCGTTGG
CCCCATGAAC ATTTTCCAAA TAAACAAGAA CCCTGGGAGA TTTTATGGTT ACGCATTGAT
GGCGCTAAAC TCAACAATAT CATGCAGATC CTTGATGTTG CCCAACAACC GGTTTTTGAA
TTCACCACCC CTGAAACCAT CACCGATATT TATCACCGCC TATTTGATTT AATGCAGAGT
CATACCCTCG TGGCGGATGC CCATTGCGAT GTGCTGTGTT CCCAACTGAT ATACACCCTG
CTGGAGAATC GCAGTTTCGA TGCCACGAAA TCGCCGGTCA TTTCCCATCG TGGGCTGGGT
CGGCTGATTT ATCAGATTCA TAGCCATTAC AATGATGACT GGGATATTGA TAAGTTTATG
CAGTATTGCC AAGTGAGTAA GTCGCAACTT TTTCGATTAT TTCAGGAGAC ATTTAATCAA
AGCCCTTTGA GATGGCTTAA AAATTATCGC CTTTCCCAAG CGCGTCGTTT ATTAGTGGAA
ACCGAGGAGA CCATTAGCCG TATTGCTGGG CAGGTGGGGT ATAACGACCC GCTGCATTTT
TCCCGTGATT TTCATCGGTC AGTCGGTTTA TCCCCAAGTG ATTTTCGCCG CCAGGAGCGG
CAATTGGATA ATGACCGTCA CGACTGA
|
|---|
| Protein sequence | MQRTQVVANW YRESDEFSTL VNYRILRAGH IRAADNFHVR RQSVAGHELI FCLNGSGFIR
LENNLHEVKK GNLAWLPVRW PHEHFPNKQE PWEILWLRID GAKLNNIMQI LDVAQQPVFE
FTTPETITDI YHRLFDLMQS HTLVADAHCD VLCSQLIYTL LENRSFDATK SPVISHRGLG
RLIYQIHSHY NDDWDIDKFM QYCQVSKSQL FRLFQETFNQ SPLRWLKNYR LSQARRLLVE
TEETISRIAG QVGYNDPLHF SRDFHRSVGL SPSDFRRQER QLDNDRHD
|
|---|
| |