| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0339 |
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| Symbol | |
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| ID | 5388111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 397578 |
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| End bp | 399776 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640863309 |
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| Product | putative VgrG protein |
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| Protein accession | YP_001399333 |
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| Protein GI | 153949195 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGCTC ATGATAAAGC TAATAATAAT AAAGCCGCGG ACAAGACCGG CGCAGTGACG
CCGACCCATA TCGTCTCGCC GGAGGCCGCC CCAACCGTGA GTGGCGCTCA GATGACCGGG
ATGGCCGGGG GGATCGGGGA TGCGGTGGGC GGCACTGCCG GTAAGCGCAT CAGTCAGGCT
GCCGAGGTGG CTAAAACCGC CCTGGACGCC AAGGCAAAAG TACTGGACGC GGGTGTTAAA
CCGATGAGTG TGGCGGCAAG TGGCGCAGGA GTAGCATTAC CGGACAGCGC CGCGGCGGCG
CTTACCCGCC TGGTCAAACA GCCCTCCGGC CTGCAATTTA CCCTGACGGC GGCCAGTTTA
CCGCCCCAGA CCTTTGCGGT GGTGGATTTC ACCCTGAGCG AGATGCTCTC CTCGCCGTTT
GTGCTCAATG TCGGGCTGGC GAGTGCCGAT CCGGCGGTGG ATTTTGCGGC GGTATTGGAT
GAAGACGCCA CGCTGTTTAT CTGGCGCGAA GGGGTACTGC AACGCAGCAT CACCGGCATG
GTCGCCAGCT TTGAACAGGG CGATACCGGT TTTCATCAGA CCCGCTACAG CATGGTGATC
CGCCCGGCGC TGTGGCGCAC CAGCCTGCGG CGCAATGCCC GCATCTTCCA GCAAGCCTCG
GTGGAAGAGA TCATCACCAC CCTGCTGAAA GAGAACGGCA TCAACGATTT TGCTTTTGGT
TTTCGCCACC CGCACCCGGT GCGCGAGTTC TGCGTGCAAT ATCAGGAGTC CGATTTTGAT
TTTATCCAGC GCCTGACGGC AGAAGAGGGG ATTTTCTACT ACTTCGAGTT CAGCGCCGGG
AAAAATACCG TGGTGTATGC CGATGATGTT GGCTCCCTGC CGAAAGGCGC GTCACTGCCC
TATAACCCGA ATGTGGCGGC GCAGGCGCAG GAACTGAGTA TCACCACCTT CACCCGCAGT
GCGCAGGTGC GCCCGGCGAT GGTGCAACTG AAAGACTACA CCTTTAAAAA CCCGAACTGG
GCCGCGGCCT TCAGCGAACA GTCGGGAGAA CTGCAAAACC AGCGACCGGA CTACGAGCAT
TTTGATTTTC CGGGGCGCTT CAAAGATGCC CAGCACGGGC AGGATTTTAC CCGTTACCGG
CTGGACGCGC TGCGCAATGA CGCCAATCTG GGGCAGGGGG CGAGCAATGA TTTTACCCTC
CAGCCGGGGC AGTTGTTCAG CCTGTACAAC CACCCGCGTG GTGATCTGAA CCACGCCTGG
CAGTTGCTCG GCATTCAGCA CAGCGGTAAA CAGATGCAGG CGCTGGAGCA GGCATCTGGC
GATCAGGGCA CGGTGCTGTT CAACCACTTC AGTTTTATTC CGCACACCCA GACCTGGCGG
CCGACGCCGT TGGCTAAACC GGCGATGGAC GGCCCGCAGA TCGCCATGGT GGTGGGGCCA
CCGGGGGAAG AGATTTACTG CGACGAATAC GGCCGTATCC GCCTGCAATT TTTATGGGAT
CGCTACGGGC AGAGCAATGA CAACAGCTCC TGCTGGATCC GGGTGACCCA GCCGTGGGCG
GGCCAGGGCT GGGGCATGCT GGCCATTCCG CGTATTGGTC AGGAAGTGGT GGTGGATTTT
CTGCACGGCG ATCCGGATCA ACCGATTGTC ACGGGGCGGA CCTATCACGC CAACAACATC
CCGCCGGGGT CGTTACCGGC CAGTAAAACC CAGATGGCGT TCCGCTCAAA AACCCACAAA
GGGGAAGGCT ACAACGAAAT GCGCTTCGAG GATGCCAAAG GCGGCGAAGG GCTGTTTATG
CATGCGCAGA AAGATATGAG TACCACGGTA AAAGATAACC AGACGACGAC GGTGGAGAAA
GGTAATCAAA CCGTCACCGT GGAAAAAGGT GACAGGACAG TCACGGTCGC GACCGGAAAT
GAAACCACAG ATATTACCCA AGGGAGCCTG ACCGAGACGA TCAAAGTGCG TCGCAGTACC
TGCGCGAATT TTATTCAGGT GAAGGCTGAA GGTGATGCGC CTGGTACGCA ACTTTATACC
GCGACGGAAC AGATAAAGTT CGTGGTGGGC AAGAGCAGCA TTACCTTAAA TCCGGACTCT
ATTATTCTGC AATTTTCTGG CTCTACCTCT ATTACGCTGA ATGCCGCCAA TATTGACGCC
ATCGCGCCAT TGATTAACTT AAATAAAGAC AAGGGATAA
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| Protein sequence | MFAHDKANNN KAADKTGAVT PTHIVSPEAA PTVSGAQMTG MAGGIGDAVG GTAGKRISQA
AEVAKTALDA KAKVLDAGVK PMSVAASGAG VALPDSAAAA LTRLVKQPSG LQFTLTAASL
PPQTFAVVDF TLSEMLSSPF VLNVGLASAD PAVDFAAVLD EDATLFIWRE GVLQRSITGM
VASFEQGDTG FHQTRYSMVI RPALWRTSLR RNARIFQQAS VEEIITTLLK ENGINDFAFG
FRHPHPVREF CVQYQESDFD FIQRLTAEEG IFYYFEFSAG KNTVVYADDV GSLPKGASLP
YNPNVAAQAQ ELSITTFTRS AQVRPAMVQL KDYTFKNPNW AAAFSEQSGE LQNQRPDYEH
FDFPGRFKDA QHGQDFTRYR LDALRNDANL GQGASNDFTL QPGQLFSLYN HPRGDLNHAW
QLLGIQHSGK QMQALEQASG DQGTVLFNHF SFIPHTQTWR PTPLAKPAMD GPQIAMVVGP
PGEEIYCDEY GRIRLQFLWD RYGQSNDNSS CWIRVTQPWA GQGWGMLAIP RIGQEVVVDF
LHGDPDQPIV TGRTYHANNI PPGSLPASKT QMAFRSKTHK GEGYNEMRFE DAKGGEGLFM
HAQKDMSTTV KDNQTTTVEK GNQTVTVEKG DRTVTVATGN ETTDITQGSL TETIKVRRST
CANFIQVKAE GDAPGTQLYT ATEQIKFVVG KSSITLNPDS IILQFSGSTS ITLNAANIDA
IAPLINLNKD KG
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