Gene YpsIP31758_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0324 
Symbol 
ID5386138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp375816 
End bp376502 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content54% 
IMG OID640863294 
Producthypothetical protein 
Protein accessionYP_001399318 
Protein GI153948416 
COG category 
COG ID 
TIGRFAM ID[TIGR03360] type VI secretion-associated protein, VC_A0118 family 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACGT GGTTATTGAT TAGCTCGTTA CTGTTTTCCG GCGGTCATAC CGACGCTTTT 
TGGACGATGG GATTACCCCC CCCGGTGGCG GAAAAAGAGG AGGCGGGGAC GCTGGCACTG 
GTGATGCGTT GCCGTAGCGA AAACTCGGCT CTGGTACGGC TGGACTGTTA TGACAAAGCG 
CTCTCGCCAG TGAACGCCGT CGATGAAAAA CGGGTAAATG CTGGCCCTGC CTGGCAGCGA 
GCGATGAATC AGGAAAAGGG ACGCACTGAT CACTCCACCG CATTTCTGGT GACGGAAGGC 
GAAGGCTCGA ATCCGATGGT GCTCATTACC ACCCCTGCGA TTGGCATGCC ACCTCCACGG 
CCGGTACTGA TGTTGAGCTG CATTGACAAT ATCACCCGCT TACAGATTGC GCTGGTGGGG 
CCACAAAAAG AGAGTTCCGT TACGTTGATT ATCGACAAAG CCGGAATTAT CGACAAAACC 
CGTCTGGACG CACAGTGGTT CCTGCGTGAA AACGGCTATT TACTGGAATC CAGCCGTGGC 
CTGGCGGGTA TCGATGAAAT TAAGCGGTTG ATGTCAGCGG AAACCCTGAC CATCGAAGGG 
GCAAACGGTG CTTTTCCTCG GCTGACATTT ACTCTTTCTC AGTTAACGCC AGCGTTGAAA 
CCGCTGCGTA ACGCATGTCA TTGGTGA
 
Protein sequence
MNTWLLISSL LFSGGHTDAF WTMGLPPPVA EKEEAGTLAL VMRCRSENSA LVRLDCYDKA 
LSPVNAVDEK RVNAGPAWQR AMNQEKGRTD HSTAFLVTEG EGSNPMVLIT TPAIGMPPPR 
PVLMLSCIDN ITRLQIALVG PQKESSVTLI IDKAGIIDKT RLDAQWFLRE NGYLLESSRG 
LAGIDEIKRL MSAETLTIEG ANGAFPRLTF TLSQLTPALK PLRNACHW