Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0319 |
Symbol | |
ID | 5384342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 369750 |
End bp | 370295 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640863289 |
Product | putative lipoprotein |
Protein accession | YP_001399313 |
Protein GI | 153948365 |
COG category | [S] Function unknown |
COG ID | [COG3521] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03352] type VI secretion lipoprotein, VC_A0113 family |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAACG CCAGAGGCTA TCTCCTGACG TGGGCATTAT GTGTAGTGTT CCTATTGTCT GGGTGCAGCG GTGCATGGGA AGCCACTAAA AAGGTCGGCA AGGTGGTTAT GGACCCCGAT ATTCCGGTGG GGCAGGCTGC TGATCAACCC TCAACGGTCA GGCTAACATT GCTGTCCGAT CGCGATACCA ACCCTAATGA AAAAGGGGAA GCGGCCCCGA CTGAGATAGT GGTGGTGTAC CTAAGTGAAA ACTCCAAGCT GCTGGCCGCG GATTATGATC AGCTAAGCAG TGACGCGCTG GAGAAAACGC TGGGTAAGAA TTACATCGAT CATCAGGAAT ACACCTTACT GCCCGATCAA TTCAAGGCGC TGGACCCTAT CAAGCTGGAA GAGAAAAACA GCTATCTGGG GGTGATTGCT CACTATGCCG ATGCCAACCG CAGTGAATGG AAGAAGATCA TCAAAATAAA AGGGATCGGC CATAACTACC AGGTTTTGGT CCATGTCAGA TCAAACGATG TCGATCTAAG GAAAGAGGAA GAATAA
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Protein sequence | MNNARGYLLT WALCVVFLLS GCSGAWEATK KVGKVVMDPD IPVGQAADQP STVRLTLLSD RDTNPNEKGE AAPTEIVVVY LSENSKLLAA DYDQLSSDAL EKTLGKNYID HQEYTLLPDQ FKALDPIKLE EKNSYLGVIA HYADANRSEW KKIIKIKGIG HNYQVLVHVR SNDVDLRKEE E
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