Gene YpsIP31758_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0319 
Symbol 
ID5384342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp369750 
End bp370295 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content50% 
IMG OID640863289 
Productputative lipoprotein 
Protein accessionYP_001399313 
Protein GI153948365 
COG category[S] Function unknown 
COG ID[COG3521] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03352] type VI secretion lipoprotein, VC_A0113 family 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACG CCAGAGGCTA TCTCCTGACG TGGGCATTAT GTGTAGTGTT CCTATTGTCT 
GGGTGCAGCG GTGCATGGGA AGCCACTAAA AAGGTCGGCA AGGTGGTTAT GGACCCCGAT
ATTCCGGTGG GGCAGGCTGC TGATCAACCC TCAACGGTCA GGCTAACATT GCTGTCCGAT
CGCGATACCA ACCCTAATGA AAAAGGGGAA GCGGCCCCGA CTGAGATAGT GGTGGTGTAC
CTAAGTGAAA ACTCCAAGCT GCTGGCCGCG GATTATGATC AGCTAAGCAG TGACGCGCTG
GAGAAAACGC TGGGTAAGAA TTACATCGAT CATCAGGAAT ACACCTTACT GCCCGATCAA
TTCAAGGCGC TGGACCCTAT CAAGCTGGAA GAGAAAAACA GCTATCTGGG GGTGATTGCT
CACTATGCCG ATGCCAACCG CAGTGAATGG AAGAAGATCA TCAAAATAAA AGGGATCGGC
CATAACTACC AGGTTTTGGT CCATGTCAGA TCAAACGATG TCGATCTAAG GAAAGAGGAA
GAATAA
 
Protein sequence
MNNARGYLLT WALCVVFLLS GCSGAWEATK KVGKVVMDPD IPVGQAADQP STVRLTLLSD 
RDTNPNEKGE AAPTEIVVVY LSENSKLLAA DYDQLSSDAL EKTLGKNYID HQEYTLLPDQ
FKALDPIKLE EKNSYLGVIA HYADANRSEW KKIIKIKGIG HNYQVLVHVR SNDVDLRKEE
E