| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0317 |
|---|
| Symbol | |
|---|
| ID | 5387476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 367277 |
|---|
| End bp | 368308 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640863287 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001399311 |
|---|
| Protein GI | 153950860 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTGAGA ATGTAAATGG GGTTGAGGCA AGACCCGAAG GGCAGGCATT GGATGTTTCA
CGTTATAACT TTTTTCAATT GGTCGAATTG CTCAACCAAT TGGCGGTAGC GTGGCAAGGT
GCGGCCCCTG TGGCGACCCC AGCCAATGAA GCCATCCGTT TTAAATCGAC CGCCAGTTTG
GCATTCCCGA CCAGAGATGT GATCGCACTG GACACCTCCG CCCGAGGTCA ATTTGAGCTA
GAGGTCTCTT TCCTTGGATT GCATGGCAGC CAATCGCCGC TACCAGGATA TTACCTCGAT
TCGTTAGCGT GGGAGGATGC GCAGAATGAG AACCGGTTGA CGGATTTCAT GAACGTATTC
AATCACCGCC TGTTAACGCT ACTGCATCAG ATTTGGCGTA AATACCGTTA CTACATCTGC
TTTGACAATG GCGGTGATGA TGCATTTTCA CAACGCATGT TCTCGCTGGT GGGGTTAGGT
AGCGAGGTCG TCCGCAATAA ATTGCAGATC AATCACAGCA AAATGCTGGC TTATGCAGGG
CTGCTGGCCA GCCCCGGCAG AGCACCTGAA GTAATTTGCA GCCTTGTCTC ACATTGCTTC
AATTTGCCAG ATATCACCTT ACACAGTTGG CAGCTACGCA AGGTGGATAT TGCCCCCTCA
CAGCAGAATC GCTTGGGGAC GAGGGTGAAA GTCCGTGGCA AGAAATATGA TGAAAAATCA
GTGCTTGGCG TTAATTTCTC CATCGGTTCA CGGGTTGCGG ATCGTAGCGG GAAATTCTTG
TTGTGCATCA ATAAGCTGAC GCGAGAACAG TTCTTATCCT TTTTACCCAA CGGGGCTAAT
TACGCCTCGT TAGTGATGTT TGTCGCCTTC ATTATGCGCG ATCAATTCGC GTGGGATTTA
CGTCTTGGGT TGGCCGAGCA ACAGGTGGGC GGGATGGTTC TGGGAACCGA GCAAAATAGC
CTCTTGGGCT GGACCAGTAT CCTCGGCGAT CCCGAACAGA AACCCAGCGT AACGATTGGT
GTAATGGAAT AA
|
|---|
| Protein sequence | MVENVNGVEA RPEGQALDVS RYNFFQLVEL LNQLAVAWQG AAPVATPANE AIRFKSTASL
AFPTRDVIAL DTSARGQFEL EVSFLGLHGS QSPLPGYYLD SLAWEDAQNE NRLTDFMNVF
NHRLLTLLHQ IWRKYRYYIC FDNGGDDAFS QRMFSLVGLG SEVVRNKLQI NHSKMLAYAG
LLASPGRAPE VICSLVSHCF NLPDITLHSW QLRKVDIAPS QQNRLGTRVK VRGKKYDEKS
VLGVNFSIGS RVADRSGKFL LCINKLTREQ FLSFLPNGAN YASLVMFVAF IMRDQFAWDL
RLGLAEQQVG GMVLGTEQNS LLGWTSILGD PEQKPSVTIG VME
|
|---|
| |