Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0316 |
Symbol | |
ID | 5387339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 365436 |
End bp | 367256 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640863286 |
Product | hypothetical protein |
Protein accession | YP_001399310 |
Protein GI | 153947194 |
COG category | [S] Function unknown |
COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTTCG AAAAGTATTT CAGGGACGAG CTGGACTACC TCCGGCAATT AGGACGCGAT GCCGCAATAG AACGGCCTCA TCTCGCTGCA TTTTTATCTG AGCAAGGTTC TGATCCGGAT GTTGAACGTT TGCTGGAAGG CTTTGCTTTT CTAACGGGCA ACCTGCGTGA AAAAATCGAT GATCAATTCC CTGAATTGAC TCATGGTTTA CTGAATATGT TGTGGCCGAA CTACTTACGG CCAATACCGA GCATGACCAT CATCGAGTAC ACACCGGATG AAAGTGTGGT CACCGAGGCG ACGCTGGTGA AACGGGGTAG CCAAGTGATG AGTATCCCCA TCGCACAAAA TGGTCAGCGC AGCGCGTTTA TCAACAGTAA TGCTCATGCC GGGCCACAAT GTACTTTTAC GTTGTGCCGT GATGTGTGGT TGTTCCCCAT GTCCATCCGG GAGATCTCGG CGAACAGCAG TAACGAACAA GGCATTTTGA GTGTTCACTT TGCCGCCAAA GCGGAATTGA ACTTACAAGA CCTGCAACTG GATAAATTGC GCTTTTATCT GGGCGAAGAC AACTACACCA GCACGCAACT CTATTTCTGG ATTAACCACT ATTTCGAACG CGCTGAACTG GTTGTCAACG GGATAACCAT CCCGATGCCT GATTTTGACT TTAACCCAGT GGGCTTTGAG CGCGATGATG CCCTCTTGCC GTACCCGAAA AACGCCTATA TGGGTTACCG GATCCTGCAA GAGTATTTTT GCTTCCCTGA AGGCTTTTTG TTCTTTGATG TCAATGGTGT GGTCGATTTT CCGCCGCACT TGAATGCCAG TGAATTCTCT CTGAATTTGT ATTTCTCTCA GGCATTGCCG CCGGACGTGA AAGTCCGCTC CACCACACTG CGGATGAATT GCACACCTGC GGTGAACCTG TTCCAACATG ACAGTGAAGC GATTGATCTT GATGGAACCC AGACGGAATA CCCGCTCTGT GTCAGCTACC ATAATCCGGA TCACTACGAC ATCTTTTCAG TTGATCGGGT TGACAGTTGG CTCAGTGAAA AAGGTGCTCC TAAGGGGCGC GGCCGGGGGC ATGGCAGGGT GTACACCTCG TTTGAGAGCT TCCACCATCA GATCGAACAC TCGCAAGAAA AGACCGCACT TTATTACCGC CTACGTGTGA AAAATTCATT ATTCCGTAAG GGATTCGAAC ACTACATTTC CTTTGTTCGC AGTGATGAAT CGAAGCTGGT GCTTGCTGAA GAGAATGTCT CGGTCAGCCT GACGTGCACC AACCGTGAGT TGCCGCTGTC GTTGCGCGTT GGTGATATCA ATCAACTCAG CACAGACAGC CCTTCATTCG CGACGTTCCG CAATATTACC CGTCCTTCCG TGCCGTTGTA TCCGGTGCTG GATGGGGGCC TGCATTGGTC ATTGCTCTCC AATATGTCGT TGAACTACAT GTCCTTACTG GATAAGGACG CGTTGAAGCA AATTCTGCAT ACCTATGATT TCCCAAGCCT GCATAACCGG CAATCTGCCA GGGCATCGCA AAAGAAACTG GACGCTATCC AACGTATTGA AACACAACCG ATTGACCGGT TGTTTCGTGG CTTACCTGTC AGAGGGCTAC AAACCACGCT ATGGCTGGAG CAAGGGGCCT TTAGCTCTGA AGGCGAGCTT TATCTCTTCA GCACGGTATT AGCTCGCTTC TTCTCACTGT ATGCCAGCGT CAATGCGTTT CATCTTTTAA AAGTCATCAA TCTTGATAAT CAGGAATGTT ACGAATGGCC GGTACAGACA GGTCAACATG CACTGATGTA A
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Protein sequence | MSFEKYFRDE LDYLRQLGRD AAIERPHLAA FLSEQGSDPD VERLLEGFAF LTGNLREKID DQFPELTHGL LNMLWPNYLR PIPSMTIIEY TPDESVVTEA TLVKRGSQVM SIPIAQNGQR SAFINSNAHA GPQCTFTLCR DVWLFPMSIR EISANSSNEQ GILSVHFAAK AELNLQDLQL DKLRFYLGED NYTSTQLYFW INHYFERAEL VVNGITIPMP DFDFNPVGFE RDDALLPYPK NAYMGYRILQ EYFCFPEGFL FFDVNGVVDF PPHLNASEFS LNLYFSQALP PDVKVRSTTL RMNCTPAVNL FQHDSEAIDL DGTQTEYPLC VSYHNPDHYD IFSVDRVDSW LSEKGAPKGR GRGHGRVYTS FESFHHQIEH SQEKTALYYR LRVKNSLFRK GFEHYISFVR SDESKLVLAE ENVSVSLTCT NRELPLSLRV GDINQLSTDS PSFATFRNIT RPSVPLYPVL DGGLHWSLLS NMSLNYMSLL DKDALKQILH TYDFPSLHNR QSARASQKKL DAIQRIETQP IDRLFRGLPV RGLQTTLWLE QGAFSSEGEL YLFSTVLARF FSLYASVNAF HLLKVINLDN QECYEWPVQT GQHALM
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