Gene YpsIP31758_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0315 
Symbol 
ID5386993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp364996 
End bp365436 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content48% 
IMG OID640863285 
Producthypothetical protein 
Protein accessionYP_001399309 
Protein GI153949284 
COG category[S] Function unknown 
COG ID[COG3518] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03357] type VI secretion system lysozyme-related protein 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCGC TTCTTAATTG GGATCGAGGG AGTTCTGCCA GTTTGTTTGA CCGCATACAG 
GGGAAGGGCG CTAGCTCTTC CTCCGATGGC CGTCTGCGTG AGCTATTGAA TTCAATCCAA 
AAGCATTTGA ACGAGGTCCT TAACTCTCGT CCAGGTGCTT GTCAAAGTGC GGTCGATCTC 
GGGGTTATCG ACCTCAATGA TGCGACCGCC ACCTCATCTG ATTTTCGAAA AAGTATTGAG 
AAAGCCATTA AGGATTGTAT CGAGAACTAC GAACCCCGAA TTTCTGCCGT TACGGTTCAA 
TCCTTGCTGA ACCATGGCGA CCCACTGCAA CTGAGTTTCC ATATTAGCGC TCGTGTTAAT 
TTCGACGATA TGGGTGATGT CGTTGAGTTC AACATTCAGT TAGACAATAA CCGCCGTTAC 
TGCTTTAACC AGGAAACATA A
 
Protein sequence
MAALLNWDRG SSASLFDRIQ GKGASSSSDG RLRELLNSIQ KHLNEVLNSR PGACQSAVDL 
GVIDLNDATA TSSDFRKSIE KAIKDCIENY EPRISAVTVQ SLLNHGDPLQ LSFHISARVN 
FDDMGDVVEF NIQLDNNRRY CFNQET