| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0300 |
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| Symbol | |
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| ID | 5387955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 346478 |
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| End bp | 348166 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640863270 |
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| Product | hemolysin activator protein |
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| Protein accession | YP_001399294 |
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| Protein GI | 153950832 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.00625551 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAGAA AACGTACTGC GTTATGGCTT GTACTCAGTA CTGGCGCTCA AGCCGAGACG
CCTTTGGCCA TAGAGACCCC ATTTCCCATT AATGAATCTC GCCAGTCATT ACAAAATAAT
GCTAAAGAAA TTAATCAGTT AATAGAAGAA AAGCGCCACC AACAGATAAC GCAACGCAAC
ACCGGACAAG GTGAATTATC TCGCCCGGAA AACCCCGCTG CGCCAGAGCT GCCAGAAGAT
ACACAGTGCT TGCCCATTAA TGGTGTTTAT ATTCAGGGGA TCACCTTATT AACAGAGGAT
GATTTAAATG AATTAAGTGC GATACCTGAA CAATGTATTC ATCCGGAGAA CATTAACCTT
CTGACCCGTG AACTCACTAA TATCTATATG GATAAAGGGT ATATCACGGC ACGTATTCAA
TTTATTCCAC CAGATGCTGA TGGGAAGTTA GGTCTGGATA TTACCGAAGG GTTTGTCGAA
GCGATTGATA GCACGGACAC CGGGTTAGAT GGTGAGACAG TCTTCCCGAA TATGATCGGT
AAGCCGCTCA ATATTACTCG CCTTGACCAA GGGTTGGACC AGGCAAACCG TTTGCCCTCA
AATAAAGTCA CCGTCGATAT TCTGCCCGGA ACACTGCCCG GTGGATCTAT TCTTAAACTG
CATAATACAC CGTCAACCCC TTGGCATTTG ACCACCTCAC TCGACAATTA CGGCAATAAA
AATACCGGTG AATGGCTAAA TCGCAACGCC TTGTCTTTTG ATAATCCACT GGGCTTATCG
GATTCTGTCA GTATCAATAT CAGTAATACC GTTGATCGCC CCCAACATAA TTATAGCCGT
GCTTACTCAA TGTTTTATTC GGTCCCCTAC GGTGCCTTGA CCTTTAGTGG CTTTGGCAGT
TATGCCGAAT ACCGCTATCC GCTGAAATTG CAGTTTAATA CAGTCAAGTT ACATGGAGAA
ACACAGCAAC ACGGTTTACG GGCAGATTAT GTTTTCTATC GCGATCAAAA CCAGATTAAT
GGGCTAAGTG CGCAATTAAC CTATAAACGG GCCAGTAATT ATCTGAATGA AGAAAAAATT
GCGATCAGCA GCCCGACGCT AACAATCTTT GAATTAGGTC TTAATCACCT GCACGTCCTG
CCAATGGGTC TGTTTAATAT CAATGTCAGC ATTGAGCAGG GCTTGCCTTG GCTGGGCGCC
GAGCGCTCAA ATGGCCCATT AGCGAACTAT CAGGATAGCC AATTCACTAA AGCTAAGGCT
TCAATTACTT CCAATCACTA TTTTGCACTG TTTGATGATG CCTATCTGCT CAGCAATCAA
TTTTATGGCC AGTACACCCG TGACCGGTTA CCCGGTGTGG AATGGCTCAG CATCACTGAC
AGCACTGCCA TCCGTGGCTT TAGCCGCAAT ACCTTATCCG CCGATCAAGG CTGGTACTTA
CAAAATACCC TTTCCCGTCG TTTCACCTTG GGTGACGCCA CGCTAACCCC TCGCGTAGGC
CTGGATACGG GCCGTATCCA GCAAAAGCCA CAGGGGTGGG TCAGCGCTAT GGGGCTAAGC
GCTGGCGTCA GCCTTAATTA CCAGAATGCC ACATTGGATA TAGAGGCCAG CCGCGGCCAC
TTACTCTCCG GCCCATCGAA GATTAACGAT CCAACACAAA TTCTGGCGCG TTTTTCTTAC
CGCTTTTAA
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| Protein sequence | MIRKRTALWL VLSTGAQAET PLAIETPFPI NESRQSLQNN AKEINQLIEE KRHQQITQRN
TGQGELSRPE NPAAPELPED TQCLPINGVY IQGITLLTED DLNELSAIPE QCIHPENINL
LTRELTNIYM DKGYITARIQ FIPPDADGKL GLDITEGFVE AIDSTDTGLD GETVFPNMIG
KPLNITRLDQ GLDQANRLPS NKVTVDILPG TLPGGSILKL HNTPSTPWHL TTSLDNYGNK
NTGEWLNRNA LSFDNPLGLS DSVSINISNT VDRPQHNYSR AYSMFYSVPY GALTFSGFGS
YAEYRYPLKL QFNTVKLHGE TQQHGLRADY VFYRDQNQIN GLSAQLTYKR ASNYLNEEKI
AISSPTLTIF ELGLNHLHVL PMGLFNINVS IEQGLPWLGA ERSNGPLANY QDSQFTKAKA
SITSNHYFAL FDDAYLLSNQ FYGQYTRDRL PGVEWLSITD STAIRGFSRN TLSADQGWYL
QNTLSRRFTL GDATLTPRVG LDTGRIQQKP QGWVSAMGLS AGVSLNYQNA TLDIEASRGH
LLSGPSKIND PTQILARFSY RF
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