| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0220 |
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| Symbol | rhtB |
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| ID | 5387565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 247991 |
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| End bp | 248611 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640863186 |
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| Product | homoserine/homoserine lactone efflux protein |
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| Protein accession | YP_001399217 |
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| Protein GI | 153948903 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTAG ACTGGTGGTT AACCTATCTG CTGACAACAT TGATCCTCAG TCTTTCTCCC
GGTTCGGGGG CCATTAACAC GATGAGCACT GCCATCAGCC ATGGTACGCG TGGGGTCTTT
GCTTCCATTT GCGGGTTACA ACTGGGCCTG GCGGTGCATA TCGTCTTGGT TGGCGTCGGT
CTTGGTGCCC TGGTCTCTCA ATCCTTACTG GCATTTGAAA TATTAAAGTG GCTCGGTGCG
GCTTACTTAA TTTGGCTTGG TATTCAACAA TGGCGTGCAG CCGGGTCGCT TGACCTGCAT
GCACTGGCAA ACAGTATGCC CAGGCGTAAG CTGTTTAAAC GTGCGGTGTT TGTTAACCTG
ACCAATCCAA AAAGCATTGT TTTTCTGGCC GCGTTATTTC CACAATTTGT ACTGCCACAG
CAACCGCAGG TGGCACAGTA TTTGATTTTG GGCAGCACCA GTGTGATTGT CGATATTATC
GTGATGATTG GTTATGCCAC TTTGGCTACA CGTATTGCCC GTTGGATTAA ATCGCCACAG
CAAATGAAAC TCTTGAACCG AATATTTGGC GGCCTATTTA TGTTGATTGG TGCATTATTA
GCCACAGCGC GCAAAGTATA A
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| Protein sequence | MTLDWWLTYL LTTLILSLSP GSGAINTMST AISHGTRGVF ASICGLQLGL AVHIVLVGVG
LGALVSQSLL AFEILKWLGA AYLIWLGIQQ WRAAGSLDLH ALANSMPRRK LFKRAVFVNL
TNPKSIVFLA ALFPQFVLPQ QPQVAQYLIL GSTSVIVDII VMIGYATLAT RIARWIKSPQ
QMKLLNRIFG GLFMLIGALL ATARKV
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