| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0197 |
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| Symbol | hemD |
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| ID | 5386195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 224911 |
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| End bp | 225660 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640863163 |
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| Product | uroporphyrinogen-III synthase |
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| Protein accession | YP_001399194 |
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| Protein GI | 153948434 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.00133341 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAATCC TGGTCACCCG TCCATCCCCT GCTGGGGAGC AATTAGTCAC TCGCTTGCGT
GCTCTGGGCC GGGTTGCCTA CCATGCGCCA TTGATTGATT TTTCCCCAGG AAGAGACCTG
CCCAAACTGC CGGAATTATT GCAAGATATG CAAGCGGGAG ACTTGGTTTT TGCTTTATCA
CAGAACGCGG TCCGCTACGC TAACCCGCTG TTAAAAAGAA ATAAACTGTC ATGGCCTGTG
CAGTTATCTT ATTATGCTAT TGGCCGTACA ACCGCATTAG CACTGCATAC CGCCAGCCGT
TTGCATGTCA CTTTCCCACC AATGGGGGAG ACCAGTGAAA TGCTGCTATC ATTGCCCCTG
CTGCAAAATT TGGCCGGTAA AAAGGCACTG TTATTACGCG GTAATGGGGG CCGGGAGTTG
CTAGGCGCAA GCCTCGCAGA ACGCGGAGCG GCCGTGACCT TCTGCGAATG CTATCAACGC
AGTCCCATCT ATTATGATGG CAGCGAACAA AGTGCTCACT GGCAACGTGC CGGTGTTGAT
ATTCTGGTGG TCACCAGCGG CGAAATGTTA CAACAGATCT ATACTTTAGT TCCTGATTAC
TATCGTTCTT CCTGGTTACT GCGTTGCCGT TTAATCGTTG TGAGTGATCG TTTAGCGGCC
TTAGCCACCC AAATGGGGTG GACGGAGGTC CGGGTAGCAG AAAATGCCGA TAATGACGCA
CTGATCCGTG CGTTACAAGA CCTTCAATAA
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| Protein sequence | MTILVTRPSP AGEQLVTRLR ALGRVAYHAP LIDFSPGRDL PKLPELLQDM QAGDLVFALS
QNAVRYANPL LKRNKLSWPV QLSYYAIGRT TALALHTASR LHVTFPPMGE TSEMLLSLPL
LQNLAGKKAL LLRGNGGREL LGASLAERGA AVTFCECYQR SPIYYDGSEQ SAHWQRAGVD
ILVVTSGEML QQIYTLVPDY YRSSWLLRCR LIVVSDRLAA LATQMGWTEV RVAENADNDA
LIRALQDLQ
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