| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0122 |
|---|
| Symbol | metL |
|---|
| ID | 5388299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 128347 |
|---|
| End bp | 130782 |
|---|
| Gene Length | 2436 bp |
|---|
| Protein Length | 811 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640863081 |
|---|
| Product | bifunctional aspartate kinase II/homoserine dehydrogenase II |
|---|
| Protein accession | YP_001399122 |
|---|
| Protein GI | 153947213 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases |
|---|
| TIGRFAM ID | [TIGR00657] aspartate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCAA CAGCGGTAGC AGCGGCGGCA ACGGGCCGTC AACTGCATAA ATTTGGTGGC
AGTAGCCTTG CGGATGTGAA GTGTTATCTA CGGGTGGCTA ATATTATGGC CAACTACAGT
CACCCCGGCG ATCTCATGGT GGTGTCTGCT GCCGGGAGCA CGACAAACCA GTTGATCAGT
TGGTTGAAAC TCAGTCAAAA CGACCGTCTT TCTGCTCATC AGGTACAGCA AAGTCTGCGT
CGTTATCAAC ACGATCTGAT CAATGGCTTA TTGCCTCCAG AAATGGCAGA GCCATTAATC
AGTGAGTTTA TTCATGATTT AGAGCGCCTG GCGGGCTTGC TGGATAATAA AATTGATGAT
GTGATTTATG CTGAAGTGGT TGGTCATGGT GAAATTTGGT CAGCCCGCTT GATGTCTGCG
CTACTGAATA AGTTGGATAT GGATGCCGTC TGGCTTGACG CCCGCCGTTT CCTACGTGCA
GAGCGTGCAG CGCAACCACA AATTGATGAA AGCCGCTCTT ATCCGTTACT GCAACAATTA
ATGGCCCAAC ACCCTCACCA GCGTTTGGTG GTGACTGGTT TTATCTCGCG CAATGAGGCG
GGTGAAACGG TCTTGCTTGG CCGTAATGGC AGTGACTATT CGGCGACGCA GGTCGGGGCA
TTGGCCGGGG CCGAGCGTGT CACCATCTGG AGTGATGTTG CCGGGGTGTA CAGTGCCGAT
CCACGTAAAG TGAAGGACGC TTGCCTGCTA CCATTATTGC GGTTGGATGA AGCCAGTGAA
CTGGCCCGCC TGGCAGCACC GGTGTTACAT ACCCGCACAT TACAACCGGT TTCTGGTAGT
GACATCGATT TGCAATTACG TTGCAGTTAT CAGCCGGAGC AGGGGTCAAC CCGTATTGAA
CGTGTGCTGG CTTCGGGATT GGGTGCCAAG ATAGTGACCA GCCACGATGA TGTTTGCCTG
ATTGAATTGC AGATTGCCAG TCACCATGAT TTCTCGTTGG CGCAGAAAGA GATCGATCTA
CTGCTCAAAC GTGCGCAAAT CAAACCACTG GCGACCGGTA TTCACCCAGA TCGTAACCTG
CTGCAACTTT GCTATACCTC AGAAGTGGTT AACAGCGCCT TACGGGTGTT GGAAGATGCC
GCTCTGCCGG GGAAACTCTC TCTGCGCGAA GGGCTGGCAT TGGTCGCACT GGTGGGGGCG
GGTGTGAGCA AGAACCCACT TCACAGTCAC CGTTTCTACC AACAACTGAA AGATCAGCCA
GTTGAGTTTG TCTGGCAGGC CGAAGACGGT ATCAGTATGG TGGCCGTCCT GCGTCTTGGG
CCGACTGAGC ACCTGATTCA AGGGTTGCAC CAGTCGTTGT TCCGGGCGGA AAAACGTATT
GGTCTGATGC TGTTTGGCAA AGGCAACATT GGTGCTCGCT GGTTGGAGCT GTTTGCCCGT
GAGCAGAAAA GTCTTTCGGC CCGCAGTGGT TTTGAATTTG TGCTAGCCGG GGTGGTCGAT
AGCCGCCGTA GTCTGCTGAG TTACGATGGT TTGGATGCCA GCCGGACGCT GGCATTTTAC
AACGATGAAG CCAAAGAACA GGATGAAGAA TCCCTGTTCT TGTGGATGCG TGCCCACCCG
TTTGACGACC TGGTGGTGTT GGATGTGACC GCCAGCCCGT CACTTGCAGA ACAATATCTG
GATTTTGCCA GTTATGGTTT CCACGTTATC AGCGCGAACA AATTAGCGGG GGCTTCAAGC
AGCAATAATT ACCGCCAAAT CCGCGATGCG TTTGCGAAAA CTGGCCGCCA CTGGTTGTAT
AACGCCACGG TAGGCGCGGG GTTACCGGTT AACCATACGG TGCGCGATCT GCGTGACAGT
GGCGACAGTA TTTTAGCGAT CAGCGGTATT TTCTCTGGCA CGCTGTCTTG GTTATTCCTG
CAATTTGATG GCTCAGTACC TTTTACCGAG CTGGTAGACC AAGCCTGGCA GCAAGGTTTG
ACCGAGCCTG ATCCAAGGGT TGATCTCTCT GGTCAGGATG TAATGCGTAA GTTGGTGATT
TTAGCCCGTG AAGCGGGTTA CGACATCGAA CCGAATCAGG TGCGGGTGGA GTCGTTGGTG
CCTGCTGGCG CAGAGAGTGG GTCGGTTGAT CAATTCTTTG AAAACGGCGA GGCATTAAAT
CAGCAAATGA TTCAGCGTTT AGAAGCCGCG AAGGAGATGG GCTTGGTATT ACGCTACGTG
GCACGCTTTG ATGCTAATGG TAAGGCGCGG GTGGGCGTTG AAGCGGTACG TACCGATCAT
CCGTTGGCTT CTTTGCTACC GTGCGATAAT GTTTTTGCTA TTGAGAGCCG CTGGTATCGC
GATAATCCGT TGGTGATTCG CGGCCCAGGC GCTGGCCGTG ATGTGACCGC TGGGGCGATT
CAATCTGATT TAAACCGCCT ATCACAACTG TTGTAA
|
|---|
| Protein sequence | MNATAVAAAA TGRQLHKFGG SSLADVKCYL RVANIMANYS HPGDLMVVSA AGSTTNQLIS
WLKLSQNDRL SAHQVQQSLR RYQHDLINGL LPPEMAEPLI SEFIHDLERL AGLLDNKIDD
VIYAEVVGHG EIWSARLMSA LLNKLDMDAV WLDARRFLRA ERAAQPQIDE SRSYPLLQQL
MAQHPHQRLV VTGFISRNEA GETVLLGRNG SDYSATQVGA LAGAERVTIW SDVAGVYSAD
PRKVKDACLL PLLRLDEASE LARLAAPVLH TRTLQPVSGS DIDLQLRCSY QPEQGSTRIE
RVLASGLGAK IVTSHDDVCL IELQIASHHD FSLAQKEIDL LLKRAQIKPL ATGIHPDRNL
LQLCYTSEVV NSALRVLEDA ALPGKLSLRE GLALVALVGA GVSKNPLHSH RFYQQLKDQP
VEFVWQAEDG ISMVAVLRLG PTEHLIQGLH QSLFRAEKRI GLMLFGKGNI GARWLELFAR
EQKSLSARSG FEFVLAGVVD SRRSLLSYDG LDASRTLAFY NDEAKEQDEE SLFLWMRAHP
FDDLVVLDVT ASPSLAEQYL DFASYGFHVI SANKLAGASS SNNYRQIRDA FAKTGRHWLY
NATVGAGLPV NHTVRDLRDS GDSILAISGI FSGTLSWLFL QFDGSVPFTE LVDQAWQQGL
TEPDPRVDLS GQDVMRKLVI LAREAGYDIE PNQVRVESLV PAGAESGSVD QFFENGEALN
QQMIQRLEAA KEMGLVLRYV ARFDANGKAR VGVEAVRTDH PLASLLPCDN VFAIESRWYR
DNPLVIRGPG AGRDVTAGAI QSDLNRLSQL L
|
|---|
| |