Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0115 |
Symbol | cytR |
ID | 5387204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 121114 |
End bp | 122142 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640863074 |
Product | DNA-binding transcriptional regulator CytR |
Protein accession | YP_001399115 |
Protein GI | 153948733 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAAATA AGAAAGAATT CACAATGACC ACGATGAAAG ATGTTGCTGA AATGGCAGGT GTATCAACAG CAACCGTGTC TCGCGCGTTG ATGAACCCTG AAAAGGTTTC AACCGTGACC CGACAAAAAG TGGAACAAGC CGTTTTGGCT GTTGGTTATT CTCCTCATGC TTTATCCCGT AATATTAAGC GTAATGAATC ACGTACGATT CTGGTGATCG TACCCGATAT CAGTGACCCA TTTTTTGCCG ATGTCATTCA GGGCATTGAA CACGCAGCCG CCCAGCAAGG CTATCTGATA TTAATTGGTG ATTGCGCACA ACAAACCCAG CAAGAGCGCA CATTTGTTAA TCTGATTATC ACCAAACAGA TCGATGGCAT GCTGCTATTA GGCTCTAACC TGCCTTTTGA TGCCAGTAAA GAAGAGCAGC GAAATTTACC CCCGATGGTC ATGGCGAATG AGTTTGCTCC TGAGTTGGAG CTGCCGACCG TACATATCGA TAACCTGACC GCCGCTTATG AAGCCGTTAA CTATTTGCAT GAGTTGGGCC ATAAACGCAT CGCCTGTATC GCCGGGCCAG AAAGCCTGCC GCTGAGCCAT TATCGGTTAC AAGGTTATAT TCAGGCACTG CGTCGTAATG GTATTACTGT CGATAATGAC TATATTATAC GCGGGGATTT CAGCTACGAA GCGGGGGCCC AAAGCTTTGC GGCTCTTATG GAGCTGCCCC ACCCCCCCAC TGCAATATTT TCTCACAATG ATGTCATGGC AGTAGGGGCT ATCTGGCAGG CGAAGCAATT AGGGTTACGC ATCCCGCAGG ATGTCTCGCT GGTTGGCTTT GACGACTTGA AGCTGTCACA GTTTTGTGAC CCCCCATTAA CTACCGTCGC ACAACCCCGT TACCAGATTG GCCAGCAAGC CATGTTACTC TTACTGGAGC AACTGCAAGG GCATTCAGTA CAAAGTGGCT CCCGCTTGTT AGATACCGAA TTAATCATCA GGGAAAGTAC TGCTGCGCCT AAACACTAG
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Protein sequence | MENKKEFTMT TMKDVAEMAG VSTATVSRAL MNPEKVSTVT RQKVEQAVLA VGYSPHALSR NIKRNESRTI LVIVPDISDP FFADVIQGIE HAAAQQGYLI LIGDCAQQTQ QERTFVNLII TKQIDGMLLL GSNLPFDASK EEQRNLPPMV MANEFAPELE LPTVHIDNLT AAYEAVNYLH ELGHKRIACI AGPESLPLSH YRLQGYIQAL RRNGITVDND YIIRGDFSYE AGAQSFAALM ELPHPPTAIF SHNDVMAVGA IWQAKQLGLR IPQDVSLVGF DDLKLSQFCD PPLTTVAQPR YQIGQQAMLL LLEQLQGHSV QSGSRLLDTE LIIRESTAAP KH
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