Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0086 |
Symbol | |
ID | 5387996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 92209 |
End bp | 93168 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640863046 |
Product | putative transposase |
Protein accession | YP_001399087 |
Protein GI | 153950110 |
COG category | [S] Function unknown |
COG ID | [COG5464] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 0.864811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTGCTC AGGAGGATGC TCATGATTAT CATCGCCCGA TGAAAACAAC CCCTACCCCC CACGACGCTC TCTTTAAGAA TTTTATGACC CAGCCCGCCA CGGCGTGTGA CCTGCTGGAG TTTCACTTGC CGCCTGAATT GCGGCAACTT TGTGACCTGA GCACGCTGCG GCTGGAATCC GGCAGTTTCA TTGAAAACAA CCTGCGTGCC TGTTACTCGG ACGTGCTCTA TTCGCTAAAA ACGACGGTGG GAGACGGTTA TGTTTACGCT CTCATTGAGC ATCAAAGCTC CCCTGATAAA CATATGGCTT TTCGCCTGAT GCGCTACGCT ATTGCAGCCA TGCAGAGCCA TCTGGAGGCG GGGTACGATA AGTTGCCGCT GGTGATCCCC ATCCTCTTCT ATCATGGAAT GGTCACGCCG TACCCGTACC CGATGAGCTG GCTGCACGCC TTTAACCAGC CAGAACTCGC TGGACAGTTG TATTGCGGAA ACTTCCCGTT GGTTGATGTG ACGGTGATCC CCGATCATGA AATCATGACC CATCGGCGCA TTGCCCTGCT GGAACTGTTG CAAAAACATA TTCGCCAGCG TGATTTATCT GAATTATTGG ATCAACTGGT CATACTGATA GCGAGCGGTT ACACTACGGA AGATCAGCTA AAATCTGCGA TAAATTACAT CATACAGGTT GGCGAAACGG CCGAACCGGA AGTGTTCATC CGTAGCCTGG CCCACCGCTT ACCGGAGCAT GAGGAGTCAC TGATGACGAT TGCACAAAAA CTGGAACAAA AAGGTGAAGC CAGAGGTATT GTAAAAGGCC GTGTAGAAGG CCGAGTCGAA GGGGCGCAAG AGACGGCTCT GAAAATTGCT CGTACTATGC TGGCTAATGG TCTTGACCGC GCCACAGTAA TGAAAATGAC CGGTCTGAGC GAAGAAGAAT TGACTCAGAT TCACCATTGA
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Protein sequence | MIAQEDAHDY HRPMKTTPTP HDALFKNFMT QPATACDLLE FHLPPELRQL CDLSTLRLES GSFIENNLRA CYSDVLYSLK TTVGDGYVYA LIEHQSSPDK HMAFRLMRYA IAAMQSHLEA GYDKLPLVIP ILFYHGMVTP YPYPMSWLHA FNQPELAGQL YCGNFPLVDV TVIPDHEIMT HRRIALLELL QKHIRQRDLS ELLDQLVILI ASGYTTEDQL KSAINYIIQV GETAEPEVFI RSLAHRLPEH EESLMTIAQK LEQKGEARGI VKGRVEGRVE GAQETALKIA RTMLANGLDR ATVMKMTGLS EEELTQIHH
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