Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0072 |
Symbol | tdh |
ID | 5386452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 77874 |
End bp | 78899 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640863032 |
Product | L-threonine 3-dehydrogenase |
Protein accession | YP_001399073 |
Protein GI | 153946990 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAC TTTCTAAACT GAAAGCAGAA GAAGGCATTT GGATGACCGA TGTGCCACAG CCAGAGCTGG GTCACAACGA TATCATGATC AAAATTCGCA AAACGGCTAT CTGTGGTACT GACGTACATA TTTATAATTG GGATGAATGG TCACAAAAAA CCATCCCCGT ACCCATGGTC GTTGGCCATG AATATGTCGG TGAAGTGGTG GCCATTGGGC AGGAAGTTAA AGGGTTTAAT ATTGGTGACC GGGTGTCTGG TGAAGGCCAT ATTACCTGTG GTCACTGCCG TAACTGCCGT GGTGGTCGTA CCCACCTTTG TCGTAATACG GTGGGTGTTG GCGTGAATCG CCCTGGTTCG TTTGCCGAAT ATTTGGTGAT CCCTGCTTTT AACGCGTTCA AGATCCCAGA CAATATTTCT GATGAGCTTG CGGCTATTTT TGACCCCTTC GGCAATGCAG TTCATACCGC GTTATCTTTT GATTTAGTCG GCGAGGATGT GTTGGTCTCC GGGGCTGGCC CAATTGGTAT TATGGCCGCC GCAGTCTGTA AGCATGTGGG TGCTCGTCAT GTTGTCATCA CTGATGTGAA TGAATATCGC CTGGATCTGG CCCGTAAAAT GGGCGTGACC CGTGCCGTTA ACGTCAGCAA AGAGAACCTA AATGACGTTA TGACGGAATT GGGCATGACC GAAGGGTTTG ATGTGGGCTT GGAGATGTCA GGTGCTCCCC CGGCTTTCCG TTCATTACTT AATTCAATGA ATCATGGTGG TCGTATAGCG ATGCTGGGAA TACCGCCGTC TGATATGTCG ATCGACTGGA ATCAGGTTAT CTTTAAGGGG CTGTTTATAA AGGGGATTTA TGGCCGTGAG ATGTTCGAAA CCTGGTACAA AATGGCCGCG TTGATTCAAT CTGGTTTGGA CTTAACTCCG ATCATTACCC ACCGTTTCCC TATTGATGAA TTCCAGCAAG GGTTTGACGC CATGCGTTCG GGTAAATCAG GCAAAGTGGT ATTAAGCTGG GATTAG
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Protein sequence | MKALSKLKAE EGIWMTDVPQ PELGHNDIMI KIRKTAICGT DVHIYNWDEW SQKTIPVPMV VGHEYVGEVV AIGQEVKGFN IGDRVSGEGH ITCGHCRNCR GGRTHLCRNT VGVGVNRPGS FAEYLVIPAF NAFKIPDNIS DELAAIFDPF GNAVHTALSF DLVGEDVLVS GAGPIGIMAA AVCKHVGARH VVITDVNEYR LDLARKMGVT RAVNVSKENL NDVMTELGMT EGFDVGLEMS GAPPAFRSLL NSMNHGGRIA MLGIPPSDMS IDWNQVIFKG LFIKGIYGRE MFETWYKMAA LIQSGLDLTP IITHRFPIDE FQQGFDAMRS GKSGKVVLSW D
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