Gene YpsIP31758_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0071 
Symbolkbl 
ID5386176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp76653 
End bp77864 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content50% 
IMG OID640863031 
Product2-amino-3-ketobutyrate coenzyme A ligase 
Protein accessionYP_001399072 
Protein GI153948577 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCTAC CTTGTAACAA GCCCCCCTTT TATCAGCAAT TAGAACAACA ACTCGACACG 
ACTCGTACCG AAGGGTTGTA TAAAAACGAA CGCGTTATTA CTTCCGCACA GCAAGCGAAT
ATCGCTGTTG CTGATGGCAG CCGGGTGATT AACTTTTGCG CCAATAACTA TCTAGGGCTG
GCAAATCATC CAAAACTTAT TGCAGCCGCT AAAGCCGGCA TGGATTCCCA TGGGTTTGGC
ATGGCTTCAG TCCGCTTTAT CTGTGGTACC CAAGACATAC ATAAAGAGCT CGAACATAAG
CTCGCCAGTT TCCTCGGGAT GGAAGACGCT ATCCTGTACT CCTCTTGCTT TGATGCTAAC
GGCGGCCTAT TTGAAACCCT GTTAGGGCCT GAAGATGCCA TTATTTCCGA TGCGTTGAAT
CATGCCTCAA TCATTGATGG CGTACGGTTA TGTAAAGCCA AGCGTTATCG TTATGCCAAC
AATGATATGA CAGAGCTGGA AGCGCAGCTA AAACAAGCGA AAGCGGAGGG GGCTCGCCAT
ATCATGATTG CCACCGATGG CGTGTTCTCC ATGGATGGTG TGATTGCTAA CTTAAAAAGG
GTGTGTGACC TTGCTGATGA ATATCAGGCG CTGGTTATGG TCGATGATTC ACATGCGGTG
GGGGTGATTG GTGCGAATGG GCGGGGGACT CATGAATACT GCGAAGTGAT GGATCGCGTT
GATATCATCA CTGGTACCTT GGGCAAAGCA CTCGGCGGTG CATCTGGCGG TTATACTGCC
GGGCGCAAAG AGTTGGTCGA GTGGCTGCGC CAGCGTTCAC GGCCTTATCT ATTTTCAAAC
TCACTGGCTC CAGCGATTGT CGCCGCGTCT ATTGAAGTCT TGTCACTGCT GGAAGAGGGA
GGGGCATTGC GTGATCGTCT ATGGGCGAAT GCGCGTTTAT TCCGTGAGAA AATGAGCGCG
GCTGGTTTCA CTTTGGCGGG TGCTGATCAT GCCATTATTC CTGTCATGTT GGGTGAGGCT
AAACTGGCGC AGGATTTTGC CAATGCCTTG CTGAAAGAAG GCATTTATGT CACTGGCTTC
TTCTTCCCTG TCGTGCCGAA GGGCCAGGCC CGTATTCGTA CCCAGATGTC TGCAGGCCAT
ACCACTGAGC AAGTTGAACG TGCCATCGAG GCATTTGTGC GTATTGGTAA GCAACTTAAC
GTTATTGCGT AA
 
Protein sequence
MSLPCNKPPF YQQLEQQLDT TRTEGLYKNE RVITSAQQAN IAVADGSRVI NFCANNYLGL 
ANHPKLIAAA KAGMDSHGFG MASVRFICGT QDIHKELEHK LASFLGMEDA ILYSSCFDAN
GGLFETLLGP EDAIISDALN HASIIDGVRL CKAKRYRYAN NDMTELEAQL KQAKAEGARH
IMIATDGVFS MDGVIANLKR VCDLADEYQA LVMVDDSHAV GVIGANGRGT HEYCEVMDRV
DIITGTLGKA LGGASGGYTA GRKELVEWLR QRSRPYLFSN SLAPAIVAAS IEVLSLLEEG
GALRDRLWAN ARLFREKMSA AGFTLAGADH AIIPVMLGEA KLAQDFANAL LKEGIYVTGF
FFPVVPKGQA RIRTQMSAGH TTEQVERAIE AFVRIGKQLN VIA