Gene YpsIP31758_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0057 
SymbolpyrE 
ID5384616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp64868 
End bp65515 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content51% 
IMG OID640863017 
Productorotate phosphoribosyltransferase 
Protein accessionYP_001399058 
Protein GI153950260 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0177997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCT ATCAGCGCGA GTTTATCGAG TTTGCGCTTA ACAAGCAGGT GTTGAAATTT 
GGTGAATTTA CCCTGAAGTC TGGGCGCATT AGCCCTTACT TCTTCAATGC CGGGTTGTTT 
AACACCGGGC TGGATCTGGC GAAACTGGGC CGCTTTTATG CTGCTGCATT AATGGATTGT 
GGCGTCGAGT TCGATCTCCT GTTTGGGCCC GCCTACAAAG GTATCCCTAT TGCGACAACA 
ACCGCCGTGG CATTGGCAGA GCATCATGAG CGCGACGTGC CTTACTGTTT TAACCGTAAA 
GAAGCGAAAA CTCACGGTGA AGGTGGCAAT CTTGTCGGTA GCCCATTACA AGGGCGGGTG 
ATGCTAGTGG ATGATGTGAT AACCGCCGGT ACCGCTATTC GTGAATCAAT GGAGATTATC 
AATGCGCAGG GCGCGACCCT CGCAGGTGTG ATGATTTCAC TGGATCGCCA GGAGCGTGGG 
CGTGGTGAGA TTTCGGCGAT TCAGGAAGTT GAACGTGATT ATCACTGTAA GGTCATTGCT 
ATCGTGACGC TGAATGATGT GATTCGCTAT CTGGAAGATA AGCCAGAGAT GGCTGAGCAT 
TTGGTGGCAG TGCGGCAGTA TCGCGAGCAA TATGGGGTTA CCCTTTAG
 
Protein sequence
MKAYQREFIE FALNKQVLKF GEFTLKSGRI SPYFFNAGLF NTGLDLAKLG RFYAAALMDC 
GVEFDLLFGP AYKGIPIATT TAVALAEHHE RDVPYCFNRK EAKTHGEGGN LVGSPLQGRV 
MLVDDVITAG TAIRESMEII NAQGATLAGV MISLDRQERG RGEISAIQEV ERDYHCKVIA 
IVTLNDVIRY LEDKPEMAEH LVAVRQYREQ YGVTL