Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0046 |
Symbol | |
ID | 5384321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 54572 |
End bp | 55174 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640863006 |
Product | putative phage terminase, small subunit |
Protein accession | YP_001399047 |
Protein GI | 153950543 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3728] Phage terminase, small subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCTTA CAGAAGAACA GAAGGCGCTT TTCGATGCCC TGACGCAATT ACAGCGCAGA TTCGTTACAG CGCTGCTAGA GGGTGCCAAT CAAACCGAGG CATACCGAAG AGCTGGCGGT AAAGCTAAAG GTGATGGTGA GCGTTCCAAA GCCAACCAGT TAGTAACAAA TAGTAACGTT CAAGCCTTCC TCCAGTCCGT ACAGCACGAA ACAGTTAACG AGGCCATCAT GACCTACACC GAAGCATTAG AGCGACTCAC GTTGATGGGG CGCACGACAA TTCATGACAT CGCCACATTT GGCAATTATC AGATTGGCGA GGACGAGGAA GGGCAACCGG TCTTTCAGGC GTCATGGAAA TTTAAGGACT CCAAGAATAT TAAGCCCGAA CACCTGGCCG CTGTCGCTGA ATTATCCACT GGCAAAGACG GACTAAAAAT TAAGCTGCAT GATCCGAAAG CCGCCATCAA GCAACTGGCT GAAATGTGCG GATGGGAAGC ACCGAAGAAA GCCGAATTGA CCGGCCCGAA CGGTGGCCCG ATCCAAACGT CAAACCTAAC CCCGGATGAA GCCGCCGAAG CCTACCGTAA AATGATGGGC TAA
|
Protein sequence | MTLTEEQKAL FDALTQLQRR FVTALLEGAN QTEAYRRAGG KAKGDGERSK ANQLVTNSNV QAFLQSVQHE TVNEAIMTYT EALERLTLMG RTTIHDIATF GNYQIGEDEE GQPVFQASWK FKDSKNIKPE HLAAVAELST GKDGLKIKLH DPKAAIKQLA EMCGWEAPKK AELTGPNGGP IQTSNLTPDE AAEAYRKMMG
|
| |