Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0033 |
Symbol | |
ID | 5388046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 39540 |
End bp | 41249 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640862993 |
Product | asmA family protein |
Protein accession | YP_001399034 |
Protein GI | 153948902 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTC TCGGGAAAAC GCTGCTAACG TTATTGCTGC TGTTTGCGCT GTCTATCGTG CTGTGCTACG CAGTGCTTCA GACCAGTTGG GCCGCGGGCT GGCTTAGTCG TTGGGTCAGC AATAACAGTG GTTATCACCT CTCTCTAAGG GGGATCGATC ATCGATGGTC CCAACCGGGG CAAATCAGTT TTAGTGATGT CACACTAGCA CGTGCCGATC AGCCCCCGTT CCTAACCGCT CAGCAGGTCA TTTTTGGCCT GAGTTGGCGT CAACTGACTG ATCCTAAGCA TTTTCTCAGT CTGCAATTAC AAAATGGTAG CTTAACCCTC AATAACAGCA CACCGTCACT CCCGTTGCAG GCTGATACCT TACAGTTAAC CGACATGACG CTGAATACCA CGGTTGAATC AAAAAACGCG ACCAGCCAGT GGAAAATTGC AGGTCAGCAT GTCAACGGGG GGCTAGTGCC TTGGCAACCA ATACCAGGCA ACAGCTTTGG GGAAAATACC CAATTCCATT TCAGTGCTGG CTTCCTGACG ATTAATGACA TATCAGCCCA ACAGATTTAT CTGCAAGGCT CAATACAGAA AGATATCCTG ACCCTGACCA ATTTCGGGGC CAATATCGCC CAAGGGGAAT TGACCGGCAA TGCCCGTCAG TCTGCTGATG GCAGTTGGCT GGTTGATCGC CTACGTCTGA GTAATATCCG CTTGCAAACA ACGGCCAGCT TAAAAGATGT CTGGAATAAC GTTTTACAGT TACCTCCTGT CACCCTCAAA CGGTTTGATT TGATTGATGC GCGAGTTGAA GGGGACGGCT GGGCTGTGAA TGATGTCGAT CTGACGCTAA AAAACATCAC CTTTAAACAA GGGGATTGGC AAAGTGATGA TGGCGAACTG GTGTTCAATG CCAGTGATAT TATTAAAGGA AATATTCATC TGATTGACCC AATCGCGACT TTTACCTTAT CGCCTGAGGG CGTGACGATT AACCAATTCA CTACTCGTTG GCAAGATGGT CTGTTAAGAA CGCAGGGGAG TTGGTCCCGT GCTACGCATC GGTTACAACT GGGTGAGTTG ACTGTTGTTG CACTGGTTTA CACTCTACCA AACGATTGGA AGCAGCAGTG GCAACAAACA TTACCCGACT GGCTGTCTGA GGTGTATGTC GGTAAACTCA GTGCTAACCG TAATTTACTC ATTGATATCA GTCCAGATTT TCCATTCCAA ATAACCTCAT TAGATGCAAC AGGCAGCAAC CTATTACTGG CAAAAAACCA CCAATGGGGC GTATGGTCCG GTTCACTGGT TTTGAATGCC GGTAATGCAA CATTCAATAA AAACGATATC CGACGTCCTT CACTGGCGCT GAACGCCAAT GAACAACAGA TCACGTTCAG TGATTTAAGT GCGTTTACCA AAGAGGGGTT GCTAGAAGCC ACTGCCAGTA TTGATCAAAC CCCAGACAGA GCATTATCCC TCTCGCTGAC AGGCCGTTCT ATTGACCTTA ATTTTTTACA GAACTGGGGA TGGCCAGCAT TACCGTTGCA AGGGCTGGGT AACTTGAAAT TGCAGATAAA GGGCAATCTG ACAGCCGACG CACCATTGAA ACCCACCCTT AACGGCTCTC TACAGGCAAT AGACAGCAAC GGGCAACAAA TCAATCAAAC GGTATTACAT GGGGTCGTGC AGGGCACAGC AGAGCAATAA
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Protein sequence | MKFLGKTLLT LLLLFALSIV LCYAVLQTSW AAGWLSRWVS NNSGYHLSLR GIDHRWSQPG QISFSDVTLA RADQPPFLTA QQVIFGLSWR QLTDPKHFLS LQLQNGSLTL NNSTPSLPLQ ADTLQLTDMT LNTTVESKNA TSQWKIAGQH VNGGLVPWQP IPGNSFGENT QFHFSAGFLT INDISAQQIY LQGSIQKDIL TLTNFGANIA QGELTGNARQ SADGSWLVDR LRLSNIRLQT TASLKDVWNN VLQLPPVTLK RFDLIDARVE GDGWAVNDVD LTLKNITFKQ GDWQSDDGEL VFNASDIIKG NIHLIDPIAT FTLSPEGVTI NQFTTRWQDG LLRTQGSWSR ATHRLQLGEL TVVALVYTLP NDWKQQWQQT LPDWLSEVYV GKLSANRNLL IDISPDFPFQ ITSLDATGSN LLLAKNHQWG VWSGSLVLNA GNATFNKNDI RRPSLALNAN EQQITFSDLS AFTKEGLLEA TASIDQTPDR ALSLSLTGRS IDLNFLQNWG WPALPLQGLG NLKLQIKGNL TADAPLKPTL NGSLQAIDSN GQQINQTVLH GVVQGTAEQ
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