Gene YpsIP31758_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0028 
SymboltypA 
ID5384441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp34135 
End bp35958 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content49% 
IMG OID640862988 
ProductGTP-binding protein TypA/BipA 
Protein accessionYP_001399029 
Protein GI153948420 
COG category[T] Signal transduction mechanisms 
COG ID[COG1217] Predicted membrane GTPase involved in stress response 
TIGRFAM ID[TIGR01394] GTP-binding protein TypA/BipA
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGAGA ATCTGCGTAA CATCGCCATT ATTGCGCACG TTGACCATGG GAAAACTACC 
CTGGTTGATA AGTTGCTACA ACAATCTGGT ACTTTCGGTG AACGTACTGA AGCAACTGAA
CGTGTAATGG ACTCCAACGA TTTGGAGAAA GAGCGTGGGA TAACCATCCT CGCAAAAAAT
ACTGCCATTA ATTGGAAAGA CTACCGCATC AACATCGTTG ATACCCCAGG GCACGCCGAT
TTCGGCGGTG AGGTTGAGCG TGTAATGTCT ATGGTTGACT CTGTGCTGTT GGTCGTCGAC
GCAATGGATG GCCCAATGCC GCAGACCCGT TTCGTGACCA AAAAAGCCTT TGCTCATGGT
CTGAAACCTA TCGTGGTTAT CAACAAAGTT GACCGTCCTG GCGCGCGCCC TGACTGGGTT
GTGGATCAGG TGTTTGACCT GTTCGTTAAC CTGGATGCGA CCGACGAACA ACTGGACTTC
CCTATCATCT ATGCATCTGC ATTGATGGGT ATCGCGGGTG AAGACCACAA TGATATGGCA
GAGGATATGA CCCCGCTGTA TCAGGCGATT ATTGACCATG TTCCTGCTCC TGATGTAGAC
AGTTCTGGTC CGTTGCAGAT GCAAATCTCC CAACTGGATT ACAACAACTA CGTGGGTGTC
ATCGGTATCG GCCGGATCAA ACGTGGTATT GTTAAGCCTA ATCAGCAAGT TACTGTTATC
GATAGCGAAG GTAAGACCCG CAACGGTAAA GTGGGCAAAG TACTGGGCCA TATGGGTCTG
GAACGAATCG AAACTACTCA GGCAGAAGCT GGCGACATCG TTGCTATCAC CGGCCTGGGC
GAGTTGAACA TCTCTGACAC TATCTGTGAT GTGAATGCGG TTGAAGCATT GCCACCACTG
TCTGTTGATG AACCAACGGT AACCATGTAT TTCTGCGTTA ACACCTCTCC GTTCTGTGGT
AAAGAAGGTA AGTATGTGAC TTCACGTCAG ATTCTTGACC GTCTGAACAA AGAGTTGATC
CATAACGTAG CTCTACGTGT TGAAGAAACG GAAGATGCTG ATGCATTCCG TGTATCAGGC
CGTGGTGAAC TTCACCTGTC AGTTCTGATC GAAAACATGC GTCGTGAAGG TTTCGAGCTG
GCTGTTTCTC GTCCTAAAGT TATCAACCGT ATTATCGACG GTCGCAATCA AGAACCTTTT
GAAAGCGTAA CGCTGGATAT CGAAGAGCAG CACCAGGGCG CAGTAATGCA AGCCATGGGT
GAGCGTAAAG GTGACGTGAA GGACATGATC CCAGACGGCA AAGGTCGTAT TCGTCTGGAT
TATATGATCC CAAGCCGTGG CCTGATTGGC TTCCGTACTG AATTCATGAC CATGACTTCT
GGTACCGGCC TGCTGTACTC CACATTCAGT CATTATGATG ATGTGCGTCC AGGTGATATC
GGCCAACGCC AAAACGGTGT GCTGATCTCT AATGGTCAGG GTAAAGCGGT TGCGTTCGCC
TTGTACAAAC TGCAAGACCG CGGCAAGCTG TTCATCGGTC ACGGTACAGA AGTGTATGAA
GGCCAGATCA TCGGTATTCA CTCACGTTCT AATGACCTGA CGGTAAACTG CCTGACAGGT
AAGCAGCTGA CTAACATGCG TGCATCCGGT ACTGACGAAG CAACCACTTT GGTTCCTTTC
CTCAAGAAAA CGTTGGAACA GGCACTGGAA TTCATCGATG ACGATGAATT GGTAGAAGTT
ACCCCGCAAT CAATCCGTAT CCGTAAGCGT CACCTGACGG AAAACGATCG TAAGCGTGCT
GGACGTGGTC CAAGAGAAGG TTAA
 
Protein sequence
MIENLRNIAI IAHVDHGKTT LVDKLLQQSG TFGERTEATE RVMDSNDLEK ERGITILAKN 
TAINWKDYRI NIVDTPGHAD FGGEVERVMS MVDSVLLVVD AMDGPMPQTR FVTKKAFAHG
LKPIVVINKV DRPGARPDWV VDQVFDLFVN LDATDEQLDF PIIYASALMG IAGEDHNDMA
EDMTPLYQAI IDHVPAPDVD SSGPLQMQIS QLDYNNYVGV IGIGRIKRGI VKPNQQVTVI
DSEGKTRNGK VGKVLGHMGL ERIETTQAEA GDIVAITGLG ELNISDTICD VNAVEALPPL
SVDEPTVTMY FCVNTSPFCG KEGKYVTSRQ ILDRLNKELI HNVALRVEET EDADAFRVSG
RGELHLSVLI ENMRREGFEL AVSRPKVINR IIDGRNQEPF ESVTLDIEEQ HQGAVMQAMG
ERKGDVKDMI PDGKGRIRLD YMIPSRGLIG FRTEFMTMTS GTGLLYSTFS HYDDVRPGDI
GQRQNGVLIS NGQGKAVAFA LYKLQDRGKL FIGHGTEVYE GQIIGIHSRS NDLTVNCLTG
KQLTNMRASG TDEATTLVPF LKKTLEQALE FIDDDELVEV TPQSIRIRKR HLTENDRKRA
GRGPREG