Gene YpsIP31758_0023 details

Gene Information

• Locus tag: YpsIP31758_0023
• ID: 5384775
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 27266
• End bp: 27832
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640862983
• Product: hypothetical protein
• Protein accession: YP_001399024
• Protein GI: 153949868
• COG category: [S] Function unknown
• COG ID: [COG3078] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.00725137
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCAGC CAAATAAAGC ACCACGCGCG AATATTGCGG CCCCGAAGGG TACAGCAACA 
CCAAAACGTA GAAGAAAGAC CCGTGATGAG CTGGATGCTG AAGCACGTGA CCGTAAACGT 
CAGAAGAAAC ACAGTGGCAA TCGCTCAGGT GCGAGAACCA ATGTTGAGGG CAGCAATAAG 
AAAGGGCATA GCCAGACTCA AGAGAAAGAT CCGCGTGTCG GTAGTAAAGT GCCTGTACCG 
CTGGTCATTG AGAGCCAGGT CAAAGCCAAG TCAATGCCTA AGCCTGTAGA GAAAAATGTG 
GTTAAGCCAC GCCTGACGCC GGAAGAAGAG CTAGCCAAGC TGGAGAATGA CGAACGTCTG 
GATGCGCTGC TTGATCGTCT GGATAATGAC GAAGTATTGA ACAAAGAAGA CCAGGCCTAT 
GTCGATCTGA CATTAGACCG TATTGATGCC CTGATGGAGC AATTAGGCAT CGAACTGGGT 
GATGACGAAG ATGATGTTGA GCGAGAAGAG AAGCAGGAAG ATATCTTGCA GCTACTGAAA 
CGTGGTAATC CAAAAGATAC ATTTTAA 

 

Protein sequence

MKQPNKAPRA NIAAPKGTAT PKRRRKTRDE LDAEARDRKR QKKHSGNRSG ARTNVEGSNK 
KGHSQTQEKD PRVGSKVPVP LVIESQVKAK SMPKPVEKNV VKPRLTPEEE LAKLENDERL 
DALLDRLDND EVLNKEDQAY VDLTLDRIDA LMEQLGIELG DDEDDVEREE KQEDILQLLK 
RGNPKDTF