| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0019 |
|---|
| Symbol | |
|---|
| ID | 5384954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 20538 |
|---|
| End bp | 21524 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640862977 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_001399020 |
|---|
| Protein GI | 153947234 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0000857443 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACT CTGCTTTTAA TTTTCAGACC TTGTCTCCTG ACCTGATTAT GGATGCCCTT
GAGGGGGCAG GATTACGGGT AGATTCGGGG TTAACCGCGC TGAATAGTTA CGAAAACCGT
GTCTACCAGT TTATGGATGA AGAGAGTAAA CGGTATGTGG TGAAGTTTTA TCGCCCCGAG
CGTTGGAGTA GTGAACAAAT TACAGAGGAG CACCAGTTTT CTCTGGATTT GGCGGAGTCA
GAAATTCCGG TGATTGCCCC ATTGCGACTC AATGGCAAGA CTTTGCATAC TCACTGTGGA
TTTTTCTTCG CTGTTTTTCC TAGCGTTGGT GGGCGTCAGT ATGAAATTGA TAATCTTGAC
CAATTGGAGT GGGTTGGGCG TTTTCTTGGC AGAATCCATC AGGCCGCTCG TAATAGCCTT
TTCGTTGCCC GCCCAACAAT GGGTATAGAA GAGTATTTGA CAGAGCCGCG TCAGCTACTC
GCCAATTGTG ATTTAGTACC AGTAAAACAA CGGGATAAAT TTCTGGCAGC GGCAGATTTG
CTCATTACAA CGATTAAGCA GTATTGGCAT ACAGAATGGC AGCCTTTACG GCTACATGGT
GATTGCCATC CAGGAAATAT TTTGTGGCGT GATGGTCCGA TGTTCGTTGA TTTAGATGAT
GCGAGGAATG GCCCGGCTAT CCAAGATTTA TGGATGCTAT TACACGGTGA TCGCCGTGAC
CAATCTATGC AGTTGGATAT ATTGCTGGAA GCTTATAGTG AGTTTGCTGA TTTTGATCAG
CGTGAATTAG CACTAATTGA ACCCTTGCGC GCGATGCGGA TGGTTTACTA CCTTGCATGG
GTCGCCAGAC GTTGGCAAGA CCCTGCATTT CCGAAAAGTT TTCCGTGGAT GGCTGAATCT
GATTTTTGGC TCCAGCAGAC AGCATCATTC ACTGAGCAGG TTAAGCTGTT GCAGGAACCC
CCTTTGCAGC TGATGCCAAT GTACTAA
|
|---|
| Protein sequence | MNNSAFNFQT LSPDLIMDAL EGAGLRVDSG LTALNSYENR VYQFMDEESK RYVVKFYRPE
RWSSEQITEE HQFSLDLAES EIPVIAPLRL NGKTLHTHCG FFFAVFPSVG GRQYEIDNLD
QLEWVGRFLG RIHQAARNSL FVARPTMGIE EYLTEPRQLL ANCDLVPVKQ RDKFLAAADL
LITTIKQYWH TEWQPLRLHG DCHPGNILWR DGPMFVDLDD ARNGPAIQDL WMLLHGDRRD
QSMQLDILLE AYSEFADFDQ RELALIEPLR AMRMVYYLAW VARRWQDPAF PKSFPWMAES
DFWLQQTASF TEQVKLLQEP PLQLMPMY
|
|---|
| |