Gene YpsIP31758_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0015 
Symbol 
ID5386519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp17641 
End bp18849 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content50% 
IMG OID640862973 
ProductIS285, transposase 
Protein accessionYP_001399016 
Protein GI153949637 
COG category[L] Replication, recombination and repair 
COG ID[COG3328] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000501092 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAAA AGAAACTTAA AGCACTTGCG GCTGAACTGG CTAAAGGTCT TAAAACCGAA 
GCCGACCTTA ATGCATTTTC TCGTATGCTG ACAAAGCTTA CCGTCGAAAC AGCGTTAAAT
GCAGAGCTTA CCGAACACCT CGGGCACGAG AAAAATACCC CTAAATCAGG CTCGAATACC
CGCAACGACT ATTCGTCCAA AACACTGCTA TGCGACGACG GCGAAATCGA GCTGAATACG
CCACGCGACC GCGAAAACAC CTTTGAACCG CAGCTGATAA AGAAAAATCA GACGCGTATC
ACACAGATGG ACAGCCAGAT TTTGTCCCTG TACGCCAAAG GCATGACCAC CCGCGAAATC
GTCGCCACCT TCAAAGAGAT GTATGACGCC GATGTGTCTC CCACGCTGAT ATCTAAAGTC
ACCGATGCCG TAAAAGAGCA GGTTGCTGAA TGGCAAAACC GCCAACTGGA TGCTCTGTAT
CCCATTGTTT ATATGGACTG CATTGTCGTA AAAGTCCGCC AGAACGGTAG CGTGATAAAC
AAAGCAGTGT TCCTAGCGCT GGGCATCAAC ACTGAAGGTC AGAAAGAGCT GCTGGGCATG
TGGCTGGCAG AAAATGAAGG TGCGAAGTTC TGGCTAAGTG TGCTGACAGA GCTGAAAAAT
CGCGGTCTTC AGGACATTCT GATTGCCTGC GTGGATGGCC TGAAGGGGTT CCCGGATGCG
ATAAACAGTG TTTATCCGCA GACTCACATC CAGCTGTGCA TCATCCATAT GGTACGCAAC
AGCCTGAAAT ATGTGTCATG GAAGGACTAT AAAGCCGTCA CCAGCGGTTT GAAAATGGTG
TATCAGGCTC CGACAGAAGA GGCGGCGCTG ATGGCGCTGG ATAAGTTTGC GGAGGCCTGG
GACGACAAAT ACCCGCAAAT TAGCAAAAGT TGGCGTACGC ACTGGGAAAA TCTCAATACA
TTCTTCGGCT ATCCGCCCGA TATCCGCAAG GCTATCTACA CCACGAATGC CATCGAATCG
GTGAACAGCG TGATCCGTGC AGCCATTAAA AAGCGCAAAG TGTTCCCGAC AGACGACTCA
GTGCGGAAGG TTGTTTATTT GGCGATCAAG GATGCATCAA AAAAATGGAG TATGCCGATC
CAGAACTGGC GGTTAGCGAT GAGCCGTTTT ATTATCGAGT TCGGTGACCG CCTGAGCGAT
CACCTTTAA
 
Protein sequence
MDEKKLKALA AELAKGLKTE ADLNAFSRML TKLTVETALN AELTEHLGHE KNTPKSGSNT 
RNDYSSKTLL CDDGEIELNT PRDRENTFEP QLIKKNQTRI TQMDSQILSL YAKGMTTREI
VATFKEMYDA DVSPTLISKV TDAVKEQVAE WQNRQLDALY PIVYMDCIVV KVRQNGSVIN
KAVFLALGIN TEGQKELLGM WLAENEGAKF WLSVLTELKN RGLQDILIAC VDGLKGFPDA
INSVYPQTHI QLCIIHMVRN SLKYVSWKDY KAVTSGLKMV YQAPTEEAAL MALDKFAEAW
DDKYPQISKS WRTHWENLNT FFGYPPDIRK AIYTTNAIES VNSVIRAAIK KRKVFPTDDS
VRKVVYLAIK DASKKWSMPI QNWRLAMSRF IIEFGDRLSD HL