Gene YpsIP31758_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0011 
Symbol 
ID5385962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp10751 
End bp11440 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content44% 
IMG OID640862968 
ProductGntR family transcriptional regulator 
Protein accessionYP_001399015 
Protein GI153950298 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00000398907 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTAA ATACCCAACA GCAAGCCGCC CAGCGAAATC TTTCCTACTT ACTGGCTGAA 
AAGATTGGTC AGCGTATTCT CGCAGGAGAA TATGAAGCGG GCAGTATACT GCCCGGCGAA 
ATAGAGTTGG GTGAACAATT TGGTGTAAGT CGCACCGCAG TACGTGAAGC AGTAAAAATG 
CTGGCAGCGA AGGGGATGCT ATTACCGCGC CCGCGTATTG GCACTCGTGT TATGCCACAG 
ACGAATTGGA ACTACCTTGA TCAGGAATTA TTAACGTGGT GGATGACCAA GGAGAATTTT 
GATCAGGTCA TGCAACACTT CCTTATACTA AGAACATCGT TGGAACCACA AGCCTGTTAT 
CTGGCTGCCA CACACGCCAA TGAGAAACAG CGAGAGCTGT TAGCATCACT AGTTGCAGAA 
ATGCGTGCAC TGCATAGCAA CTTTAATCGT GAGCAATGGA TTCAGGTGGA TACCCAGTTT 
CATAAATTAA TTTATGAAGC CAGCGGCAAT CCATTTTTAA TCTCTTTTGC TAACTTATTC 
AGTTCGGTTT ATTACAGCTA CTTTCGTGCT ATTACTGGTG ATGAAGTGAT TAAGCTACAA 
CATCATCAGA ACATTGTAGA TACTATTCTG GCAGGTGATA ATCAAGGTGC TTTATTCGCC 
TGTCAGGTGC TATTAAAAAC GGTAGACTGA
 
Protein sequence
MQLNTQQQAA QRNLSYLLAE KIGQRILAGE YEAGSILPGE IELGEQFGVS RTAVREAVKM 
LAAKGMLLPR PRIGTRVMPQ TNWNYLDQEL LTWWMTKENF DQVMQHFLIL RTSLEPQACY 
LAATHANEKQ RELLASLVAE MRALHSNFNR EQWIQVDTQF HKLIYEASGN PFLISFANLF 
SSVYYSYFRA ITGDEVIKLQ HHQNIVDTIL AGDNQGALFA CQVLLKTVD