| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0009 |
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| Symbol | |
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| ID | 5388017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 9247 |
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| End bp | 10671 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640862967 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001399014 |
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| Protein GI | 153949117 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.000535821 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAT CTGCGCGCAG TATGGCAGGC CTTCCTTGGA TAGCGGCTAT GGCTTTCTTT
ATGCAGGCTT TGGATGCCAC CATACTGAAT ACGGCTCTCC CTTCAATCGC CGAAAGCCTT
AACCGTTCTC CGCTGACAAT GCAATCAGCC ATTATTAGCT ATACCCTGAC CGTCGCGATG
TTGATTCCAG TTAGTGGTTG GCTGGCCGAT CGTTTTGGTA CCCGACGAAT TTTTATCCTG
GCGGTTTCTT TATTTACCTT CGGATCACTG CTCTGTGCAC TTTCAGGCTC ACTGGCTTTC
TTAGTGGCTT CTCGGGTTAT TCAAGGGATC GGTGGGGCGA TGATGATGCC GGTAGCCAGG
CTGGCGCTCA TCCGGGCTTA TCCACGCAGT GAGTTATTGC CGGTTTTAAA TTTTGTCACT
ATTCCAGGGT TAGTCGGGCC AGTCATGGGG CCATTGTTGG GCGGGTTGTT GGTGACTTAT
ACCACTTGGC ATTGGATTTT TATCCTTAAT ATTCCTATTG GCTTGTTGGG TATTTTTTAT
GCCCGCAAAT ATATGCCTAA TTTCACGATG CCTAAGCGCA CTTTTGATTT TGTTGGTTTC
CTACTATTTG GTATCAGTTT AGTCATGATA TCCACCAGCC TGGAGATTAT GGGGCGGCCA
GAAATCGCAG ATTATTTACC AGCCGCAACT CTGCTAGGCG GCCTATTAAT GCTGGTTTTC
TATATATTTC ATGCCAAAGG CCATCCTAAT CCACTCATTG GTTTGCCATT ATTTAAGACC
CGGACATTCT CCGTGGGGAT TGCCGGTAAC GTGGCCTCCC GCTTAGGGAC GGGCTGTGTA
CCTTTTTTAA TGCCGTTGAT GTTACAAGTT GGATTCGGTT ATTCCGCACT TATCGCCGGT
TGTATGATGG CTCCCACCGC GATTGGATCC ATCATGGCAA AATCAGCCGT CACACAGGTG
CTGCGCTCAC TGGGCTATCG TAAAGTGTTA GTCGGTATAA CCTTAATTAT CGGGGTACTG
ATTGCCTCCT TTGCATTGCA ATCACCGGGG ATGTCGGCAT GGATGATGAT ATTGCCGCTA
TTTATATTAG GTATAGCGAT GTCGACCCAA TTTACTGCGA TGAATACAAT TACACTGGCT
GATTTGACGG ATAACAATGC CAGCTCCGGT AACAGTGTTC TGGCGGTAAC CCAACAATTA
TCGATAAGCT TTGGGATTGC TATCAGTGCG ACTGTGTTGC GTTTTTATGA TGGGTTGTCG
TTAGGCGGTA ATGTGGATCA CTTCCACTAC ACCTTTATCA CCATGGGAAT AGTGACATTG
CTATCATCTC TGGTGTTCTT GTTACTCAAA CCCAGGGATG GAGACAATTT AATTCAGGGC
CGTAATGTGA AAAAAGTAGC CCCACAGGTG AAAAATAATG TTTAA
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| Protein sequence | MIKSARSMAG LPWIAAMAFF MQALDATILN TALPSIAESL NRSPLTMQSA IISYTLTVAM
LIPVSGWLAD RFGTRRIFIL AVSLFTFGSL LCALSGSLAF LVASRVIQGI GGAMMMPVAR
LALIRAYPRS ELLPVLNFVT IPGLVGPVMG PLLGGLLVTY TTWHWIFILN IPIGLLGIFY
ARKYMPNFTM PKRTFDFVGF LLFGISLVMI STSLEIMGRP EIADYLPAAT LLGGLLMLVF
YIFHAKGHPN PLIGLPLFKT RTFSVGIAGN VASRLGTGCV PFLMPLMLQV GFGYSALIAG
CMMAPTAIGS IMAKSAVTQV LRSLGYRKVL VGITLIIGVL IASFALQSPG MSAWMMILPL
FILGIAMSTQ FTAMNTITLA DLTDNNASSG NSVLAVTQQL SISFGIAISA TVLRFYDGLS
LGGNVDHFHY TFITMGIVTL LSSLVFLLLK PRDGDNLIQG RNVKKVAPQV KNNV
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