Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0002 |
Symbol | |
ID | 5387612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 554 |
End bp | 1015 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640862959 |
Product | DNA-binding transcriptional regulator AsnC |
Protein accession | YP_001399006 |
Protein GI | 153948571 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000000000470477 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAA TTTATCAGAT CGATAATCTC GATCGCAGCA TCCTGAAAGC ATTAATGGAA AATGCACGCA CACCCTATGC TGAATTAGCC AAAAACCTCG CTGTTAGCCC CGGAACTATT CATGTAAGAG TAGAAAAGAT GCGGCAAGCA GGGATCATTA CCGCAGCTTG TGTACACGTT AACCCAAAAC AACTGGGTTA CGACGTTTGC TGCTTTATTG GCATAATCTT GAAAAGTGCC AAAGATTACC CTTCCGCCTT GAAAAAATTG GAAAGCTTAG AAGAAGTGGT TGAGGCCTAT TACACCACTG GCCACTACAG CATATTTATT AAAGTGATGT GTAAATCCAT TGATGCATTG CAGCAGGTAC TTATCAACAA AATCCAGACT ATTGATGAGA TCCAGTCAAC CGAGACACTA ATATCACTGC AAAACCCTAT CATGCGTACG ATCGTTCCTT AA
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Protein sequence | MSEIYQIDNL DRSILKALME NARTPYAELA KNLAVSPGTI HVRVEKMRQA GIITAACVHV NPKQLGYDVC CFIGIILKSA KDYPSALKKL ESLEEVVEAY YTTGHYSIFI KVMCKSIDAL QQVLINKIQT IDEIQSTETL ISLQNPIMRT IVP
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