Gene JJD26997_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_1966 
SymbolprfA 
ID5390118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp1735422 
End bp1736489 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content35% 
IMG OID640862833 
Productpeptide chain release factor 1 
Protein accessionYP_001398893 
Protein GI153952433 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGCTA GCAAACTAGA TCCTTTTTTA AAACGCTTTG AAGAGTTAAA TTCTCTTCTT 
AGCAGTTCTG ATATACTCAA TGATATCAGT AAAATGACTA CACTCTCTAA AGAACAAAAA
AATTTAGAAC CTATCGTTTT AAAAACTAAA GAGTATTTAA AAACTTTAGA CAATATAGAA
GAAAATAAAG CTTTGCTAAA CGATCCAGAA CTTGGAGAAC TTGCAAAAGA AGAACTAAAA
ACTTTAGAAG AACTAAAACC AAAACTTGAA GAAGAAATTA AAATTTTACT TCTTCCTAAA
GATCTCAATG ATGAAAGAAA TATTTTTCTT GAAATTCGTG CAGGCACAGG TGGCGATGAA
GCATCTTTAT TTGTAGGAGA TCTTGTAAAA GCTTATGCAA GATATGCTGA AAATCGTGGC
TATAAACTTG AGATTGTAAG CTCTAGTGAA GGAAGTGTAG GTGGATTCAA AGAAATCATC
ATGCTTGTTA AAGGAACAGG GGCTTATTCA AGACTTAAAT ATGAAGGTGG AACGCACCGT
GTTCAAAGAG TTCCTCAAAC AGAATCCCAA GGACGCGTGC ATACTTCTGC TATCACCGTG
GCAGTAATGC CAGAAGTTGA TGATATAGAA ATCGAAATCA ATCCAAACGA TCTTAAAGTT
GATGTGATGC GTTCTTCTGG ACATGGTGGA CAAAGTGTAA ACACTACTGA TTCAGCTGTT
CGTATCACTC ATATCCCTAC AGGTATAGTT GTAGTCAATC AAGATGGAAA AAGCCAACAC
AAAAATAAAG AAAGTGCGAT GAAAGTCCTA AAAGCAAGGC TTTATGAAAT GCAAGAGAAC
GAAAGACTAG CAAAAGAAAG TGAAGCAAGA AAATCTCAAG TAGGAAGCGG AGATAGAAGC
GAACGCATTC GCACTTACAA TTTTCCACAA AATCGTATCA GCGACCATAG AATAAATCTT
ACTTTATATC GCTTAGATGC CATTATGCAA GATGGGCTTT TTGATGAAAT CATAGAACCT
TTAATCACTC ATCATCAAGC CCAAGCTTTA CAAGAACAAA ATTTATAA
 
Protein sequence
MLASKLDPFL KRFEELNSLL SSSDILNDIS KMTTLSKEQK NLEPIVLKTK EYLKTLDNIE 
ENKALLNDPE LGELAKEELK TLEELKPKLE EEIKILLLPK DLNDERNIFL EIRAGTGGDE
ASLFVGDLVK AYARYAENRG YKLEIVSSSE GSVGGFKEII MLVKGTGAYS RLKYEGGTHR
VQRVPQTESQ GRVHTSAITV AVMPEVDDIE IEINPNDLKV DVMRSSGHGG QSVNTTDSAV
RITHIPTGIV VVNQDGKSQH KNKESAMKVL KARLYEMQEN ERLAKESEAR KSQVGSGDRS
ERIRTYNFPQ NRISDHRINL TLYRLDAIMQ DGLFDEIIEP LITHHQAQAL QEQNL