| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1823 |
|---|
| Symbol | |
|---|
| ID | 5390610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | - |
|---|
| Start bp | 1603027 |
|---|
| End bp | 1606587 |
|---|
| Gene Length | 3561 bp |
|---|
| Protein Length | 1186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640862716 |
|---|
| Product | pyruvate ferredoxin/flavodoxin oxidoreductase |
|---|
| Protein accession | YP_001398777 |
|---|
| Protein GI | 153952568 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.599326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAA TTATGAAAAC TATGGACGGA AATGAGGCTG CTGCATACGT TGCATATGCT
TTTACTGAAG TTGCTGGAAT TTATCCTATT ACACCTAGTT CTCCTATGGC TGATTACACC
GATATGTGGG CAGCTGCAGG CAAAAAAAAT CTTTTTGGAG TTCCTGTAAA AATCGTAGAA
ATGCAAAGTG AAGCAGGTGC TGCAGGTAGT GTACATGGAT CTTTGCAAGC TGGAGCTTTG
ACTACAACTT ATACGGCTTC TCAAGGATTA CTCCTTAAAA TTCCAAACAT GTATAAAATA
GCAGGTCAAT TGCTCCCCTG TGTAATCCAC GTAGCAGCGC GTTCTTTGGC TGCTCAAGCC
TTATCTATCT TTGGCGATCA TCAAGATATT TATGCGGCAA GACAAATTGG TTTTGCTATG
CTTTGTTCGC ATTCTGTGCA AGAAACCATG GACTTAGCTG GTGTAGCACA TTTAGCTGCA
ATTAAGGGAA GAGTGCCATT TTTACATTTT TTTGATGGTT TTAGGACAAG CCATGAAATT
CAAAAAGTTG AAGTAATGGA TTATGTGCAT TTTGATAGAT TATTAGATAG AGAAGCTTTG
CTTGAATTTA GAAATAATGC TTTAAATCCA GAAAATCCAA AAACACGCGG AACAGCACAA
AATGATGATA TTTATTTTCA AACTAGAGAA GTAAGCAATC GTTTTTATGA TGCTTTACCT
GATGTTGTTA ATAAATATAT GCAAGAAATT TCAAAAATCA CAGGTAGGGA ATATAAACCA
TTTACTTATT ATGGACACAA AGAGCCAGAG CGTGTGATTG TTGCTATGGG TTCTGTAACT
CAAGCACTTG AAGAGGTGGT GGACTATCTT AATGCTAAGG GCGAAAAAGT AGGGATTTTA
AAAGTTTATC TTTATCGCCC ATTTAGTTTA AAATATTTCT TTGATGTTAT GCCAAAATCG
GTGAAAAAAA TCGCAGTTTT AGATAGAACT AAAGAACCAG GAAGTCTTGG AGAGCCGCTT
TATCTTGATG TAAAATCAGC TTTCTATGGA AGAGAAAATG CTCCTGTTAT AGTGGGCGGA
AGATACGGAC TTTCTTCAAA AGATGTTGAT CCTGCTCAAA TGATAGCAGT ATTTGAAAAT
CTTAAACTTG ATAATCCAAA AGATGGTTTT ACTGTGGGTA TAGTTGATGA TGTAACTCAT
ACTTCACTGA GTACCGGAGA GAAAATTTCA CTTGGAGATG AAAGTACGAT CGAATGTTTA
TTTTACGGAC TTGGTGCTGA TGGAACTGTG GGAGCAAATA AAAACTCGAT TAAAATTATC
GGGGATAAAA CGGATTTTTA CGCTCAAGCT TATTTTGCTT ATGATTCTAA AAAATCAGGC
GGTTATACAA GAAGCCATTT AAGATTTTCT AAAAAACCTA TTCGTTCAAC TTATCTTGTT
TCAACTCCGC ATTTTATCGC TTGTTCGGTA GCGGCTTATT TGGAAATTTA TGATGTTTTA
GCAGGAATTC GTAAAGGTGG AACTTTCCTT TTAAATAGTA TTTGGAATGC TGAAGAAACC
ATAAGACAAC TTCCAGATGC AGTAAAGAAA ACTTTAGCTG AAAAAGAAGT AAATTTTTAT
ATCATCAATG CAACTAAACT AGCTCGTGAT ATAGGTTTGG GAAATCGTAC AAATACCATT
ATGCAATCAG CCTTTTTTAA ACTTGCAAAA ATTATTCCTT ATGAAGATGC ACAAAAATAC
ATGAAAGAAC TTGCGTATAA ATCTTATAGT AAAAAAGGCG ATGCCATTGT AGAAATGAAT
TACAAGGCTA TTGATGTGGG TGCTAATGGA CTTGTAAAAG TTGAAGTGGA TCCAAATTGG
AAAAATTTAG AGCTTAAAGA AAAAGAACAA ACCAATGCCT ATAAAGGTAC TGAATTTGTT
GAAAAAATCG TAAAACCTAT GAATGCAGCT AAGGGTGATG ATTTACCTGT TTCAGCCTTT
TTAGGTTATG AAGATGGAAG TTTTGAACAC GGTACAACTG AATACGAAAA ACGCGGTGTT
GGGGTTATGG TACCAAGATG GATAGAGGCA AATTGTATCC AATGTAATCA ATGTGCTTCA
GTTTGTCCGC ATGCTGTTAT CAGACCATTT TTGATTAATG ATGAAGAAAT GGTAAATGCA
CCTCGTGGTG TAAAAGATCA TGCTTTAGAA GCTAAAGGAA CCAAAGGAGA AAAATTAAGC
TTTAAAATTC AAGTTTCTCC ACTTGATTGT ACAGGCTGTG AGCTTTGTGT TCATGAGTGT
CCTACTAAAG AAAAATCTTT GGTTATGGTA CCACTTCAAG AAGAGATGGA TTTTGGTGAG
CAAGAGAATG CGGATTATTT ATTTAAAAAA ATTACTTATA AAGATGATAT TTTAAATAAA
GAAACCACAA AAGGAGCACA ATTTGCCCAA CCTTTATTTG AATTCCATGG AGCATGTCCT
GGATGTGGGG AAACTCCTTA TATTACTTTA ATTACAAGAT TGTATGGTGA AAGAATGATT
GTAGCCAATG CTACAGGATG TAGTTCGATT TATGGAGGTT CAGCTCCATC AACTCCTTAT
AGAAAAAGTG TGAAAAATGG ACACGGCCCT GCTTGGGGAA ATTCACTTTT TGAAGACAAT
GCTGAGTTTG GTTTGGGTAT GAAAATTGCA ACTGAAAATA CAAGACACCG TATTGAACAT
ATTATGAATG AAAGTATGCA AGAAGTTCCA AATGCTTTAT CAGCCCTTTT TAAAGATTGG
ATTGCAAATA AAGACAATGG TGCTATGTCT GTGGAAATTA AAGATAAAAT GATCCCTATT
TTAGAGCAAA ATAAAAATAT TAAAGCCGTG CAAGATATAT TAGAGCTTAA ACAGTATTTA
AGTAAAAAAT CTCACTGGAT TTTTGGTGGT GATGGTTGGG CTTATGATAT AGGCTATGGC
GGACTTGATC ATGTTTTAGC AAGTGGAGAA AATGTAAATA TTTTAGTACT TGATACAGAG
GTTTATTCTA ATACAGGTGG TCAAAGTTCA AAATCTTCTA GAACAGGAGC TGTGGCACAG
TTTGCAGCAG CAGGCAAACC TATACAGAAA AAAGACTTAG GTCAAATTGC TATGACTTAT
GGTTATATTT TTGTAGCGCA AGTAAACTCA ACGGCAAATT ATGCTCATCT TATCAAAGCT
ATCACTGCAG CTGAAGCTTA TGATGGACCA TCTTTGGTGA TTTGTTATTC TCCTTGTATA
GCTCATGGTA TTAAAGGTGG GCTGGGTTAC TCAGGAGAGC AAGGTGAACT TGCTACAAAA
TGTGGTTACT GGCCGCTTTA TACCTTTGAT CCGCGTTTAG AAGAACAAGG AAAAAATCCT
TTAACTCTAA CAGGAAAAGA GCCTGATTGG GATTTATATG AGCAATTTTT AATGAATGAA
GTGCGTTATA ATTCACTTAA AAAAGCAAAT CCTGAACATG CTGCTGAGCT TTTTGAACGC
AATAAAAAAG ACGCTCAACG TCGCTATAGA CAGCTTAAGC GTATTGCTAT GGCTGATTAT
AGCAATGAGG TTGAAAGCTG A
|
|---|
| Protein sequence | MDKIMKTMDG NEAAAYVAYA FTEVAGIYPI TPSSPMADYT DMWAAAGKKN LFGVPVKIVE
MQSEAGAAGS VHGSLQAGAL TTTYTASQGL LLKIPNMYKI AGQLLPCVIH VAARSLAAQA
LSIFGDHQDI YAARQIGFAM LCSHSVQETM DLAGVAHLAA IKGRVPFLHF FDGFRTSHEI
QKVEVMDYVH FDRLLDREAL LEFRNNALNP ENPKTRGTAQ NDDIYFQTRE VSNRFYDALP
DVVNKYMQEI SKITGREYKP FTYYGHKEPE RVIVAMGSVT QALEEVVDYL NAKGEKVGIL
KVYLYRPFSL KYFFDVMPKS VKKIAVLDRT KEPGSLGEPL YLDVKSAFYG RENAPVIVGG
RYGLSSKDVD PAQMIAVFEN LKLDNPKDGF TVGIVDDVTH TSLSTGEKIS LGDESTIECL
FYGLGADGTV GANKNSIKII GDKTDFYAQA YFAYDSKKSG GYTRSHLRFS KKPIRSTYLV
STPHFIACSV AAYLEIYDVL AGIRKGGTFL LNSIWNAEET IRQLPDAVKK TLAEKEVNFY
IINATKLARD IGLGNRTNTI MQSAFFKLAK IIPYEDAQKY MKELAYKSYS KKGDAIVEMN
YKAIDVGANG LVKVEVDPNW KNLELKEKEQ TNAYKGTEFV EKIVKPMNAA KGDDLPVSAF
LGYEDGSFEH GTTEYEKRGV GVMVPRWIEA NCIQCNQCAS VCPHAVIRPF LINDEEMVNA
PRGVKDHALE AKGTKGEKLS FKIQVSPLDC TGCELCVHEC PTKEKSLVMV PLQEEMDFGE
QENADYLFKK ITYKDDILNK ETTKGAQFAQ PLFEFHGACP GCGETPYITL ITRLYGERMI
VANATGCSSI YGGSAPSTPY RKSVKNGHGP AWGNSLFEDN AEFGLGMKIA TENTRHRIEH
IMNESMQEVP NALSALFKDW IANKDNGAMS VEIKDKMIPI LEQNKNIKAV QDILELKQYL
SKKSHWIFGG DGWAYDIGYG GLDHVLASGE NVNILVLDTE VYSNTGGQSS KSSRTGAVAQ
FAAAGKPIQK KDLGQIAMTY GYIFVAQVNS TANYAHLIKA ITAAEAYDGP SLVICYSPCI
AHGIKGGLGY SGEQGELATK CGYWPLYTFD PRLEEQGKNP LTLTGKEPDW DLYEQFLMNE
VRYNSLKKAN PEHAAELFER NKKDAQRRYR QLKRIAMADY SNEVES
|
|---|
| |