| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1821 |
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| Symbol | ctsD |
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| ID | 5389539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009707 |
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| Strand | - |
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| Start bp | 1601302 |
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| End bp | 1602714 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640862714 |
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| Product | general secretory pathway protein D |
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| Protein accession | YP_001398775 |
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| Protein GI | 153952576 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02519] pilus (MSHA type) biogenesis protein MshL |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.533467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGAT TAATATTAAT TAACATTCTT TTTTGCCATT ATCTTTATGC TTTAGATTGT
CAAAAGCGTC TTTTTGATAT CAGTATTAAT GAAAAATTAA GCATAGAAGA AAGTCTTGAT
GAGCTTGCAA AATATTGTTC TTTTAGTATT ATTGTTAAAG ATAAAATTGC CAAAGAAAAA
TTAGAAACAT CGCAAAATTC TGTCAATATT CATCAAATGA GTTTAGATGA AATTTTTAAT
TTTTTTATCA AAGAGCATGA TCTTAGCTAT GATTTTGATG GTAAAATTTT AAGAATTTCA
GGTATTGATA CGAAGATTTT TAAGATAAGT TATATCACTT CTATTAGAGA AGGACAAAGC
ATAACTAAAG CGTCTGTAGA CGCTAAACCA AGGCAAAGTG AATATAGCGG TAGTTTTGAT
GATGCAGAAG ATAATATGAT TAAAAGTATG GAAAAATTTG ATTTTTGGCA AAATATAGAA
AAAGAGATTA TTGTATTATT AAAAAATTCT CATGAAGATT ATGAGGTTAA AACTCCTATT
ATAAATCCCA ATGCAGGTCT TATTATAGTA ACTGGAACAA ATTCTCAGTT AAAAAGTGTG
AAAAATTATT TACAAAAACT AGAAAATCGT CTTAAAAAAC AAGTTATTAT CGATGTTAGT
ATACTTGCTG TGAGTTTAAG TGAAAGCCAT TCTAGTGGGA TTAATTGGCA AAATTTTGAT
ATAGGTTTAA ATTCACAAGC AAATAATGAA AATTCTTTTA TTCAGTTTCA AAATGGGCAA
GGTTTTGTTA AGAATTTGGG TTTAAGGGCA AATTTAAATT TTGATTCTAT TATTAACTTT
CTTTCTCAAA ATGGAAAAAC TAGCGTGCTT TCCAATCCAA AGCTTATGGC TTTAAATAAC
CAACAAGCCA TTATTTCTGT AGGCGATACT ATAAATTATC AAGTCAAAGA AAGTTCTAAA
GGTACTGAAA ATGGGACTAC TGTTAGTGAA AGTTATAATA ATTATTCTAT TTTTGTAGGC
ATTTTACTCA ATATCTTGCC TGAAATTTCT GATGATGGAA AAATAATGCT TAGGATTAAT
CCAAGCTTAA GTGATTTTAA GTATCCAGAA GATAATAAAC GACAAAAAGA ACCAAGAACT
ATCGCTCCTG ATACCATACA AAAAAAGCTT TCTAGTGTTG TGCAAGTAGA GAATAATCAA
ACTTTAATTT TAGGTGGATT GATTTCTCAC GATAAATCTA ATGAGAAAAA TTCTATCAAT
TTTCTATCAA AAATTCCAAT CCTAGGTTCT TTATTTAAAG GGGAAGTTTT AAATTCTAAA
GCAACCGAAA TTGTTTTTAT TATCACTCCA AGTATAGTAG ATAGCGTAAA TGCTCCAAGT
CTTAAAGATC TAGGATTTAA GCATTATGAG TAA
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| Protein sequence | MIRLILINIL FCHYLYALDC QKRLFDISIN EKLSIEESLD ELAKYCSFSI IVKDKIAKEK
LETSQNSVNI HQMSLDEIFN FFIKEHDLSY DFDGKILRIS GIDTKIFKIS YITSIREGQS
ITKASVDAKP RQSEYSGSFD DAEDNMIKSM EKFDFWQNIE KEIIVLLKNS HEDYEVKTPI
INPNAGLIIV TGTNSQLKSV KNYLQKLENR LKKQVIIDVS ILAVSLSESH SSGINWQNFD
IGLNSQANNE NSFIQFQNGQ GFVKNLGLRA NLNFDSIINF LSQNGKTSVL SNPKLMALNN
QQAIISVGDT INYQVKESSK GTENGTTVSE SYNNYSIFVG ILLNILPEIS DDGKIMLRIN
PSLSDFKYPE DNKRQKEPRT IAPDTIQKKL SSVVQVENNQ TLILGGLISH DKSNEKNSIN
FLSKIPILGS LFKGEVLNSK ATEIVFIITP SIVDSVNAPS LKDLGFKHYE
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